HHsearch alignment for GI: 254781096 and conserved domain: cd05290
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=90.42 E-value=1.3 Score=23.19 Aligned_cols=69 Identities=17% Similarity=0.279 Sum_probs=45.5
Q ss_pred EEEEEEECHHHHHHHHHHHHHCCC--EEEEEECCCCHHH-H--HHHH----CCC-EEEE-CCCHHHCCCCCEEEECCCCC
Q ss_conf 079994614608789999998798--6999607899889-9--9998----898-8996-79978868898999888989
Q gi|254781096|r 9 PIHFVGIGGIGMSGIAEVLHNTGH--QVQGSDVILGPNV-Q--RLHK----QGI-KVSI-GHKVENIDNAEILVLSTAID 77 (474)
Q Consensus 9 ~i~~iGigG~G~s~lA~~l~~~G~--~V~g~D~~~~~~~-~--~L~~----~gi-~i~~-g~~~~~i~~~d~vV~spgi~ 77 (474)
T Consensus 1 KI~IIGaG~VG~~-~A~~l~~~~~~~elvL~Di~~~~a~g~a~Dl~h~~~~~~~~~~~~~~~~y~~~~~aDiVVitaG~~ 79 (307)
T cd05290 1 KLVVIGAGHVGSA-VLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGPS 79 (307)
T ss_pred CEEEECCCHHHHH-HHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHHHCCCCEEEECCCCC
T ss_conf 9899996989999-999998569988799992889823799998761203589986586679989946999999867776
Q ss_pred C
Q ss_conf 9
Q gi|254781096|r 78 K 78 (474)
Q Consensus 78 ~ 78 (474)
T Consensus 80 ~ 80 (307)
T cd05290 80 I 80 (307)
T ss_pred C
T ss_conf 5