HHsearch alignment for GI: 254781096 and conserved domain: pfam01488
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=95.37 E-value=0.12 Score=30.39 Aligned_cols=72 Identities=17% Similarity=0.257 Sum_probs=48.4
Q ss_pred HHCCEEEEEEECHHHHHHHHHHHHHCCC-EEEEEECCCCHHHHHHH-HCC---CEEE-ECCCHHHCCCCCEEEECCCCCC
Q ss_conf 1276079994614608789999998798-69996078998899999-889---8899-6799788688989998889899
Q gi|254781096|r 5 QGMGPIHFVGIGGIGMSGIAEVLHNTGH-QVQGSDVILGPNVQRLH-KQG---IKVS-IGHKVENIDNAEILVLSTAIDK 78 (474)
Q Consensus 5 ~~~~~i~~iGigG~G~s~lA~~l~~~G~-~V~g~D~~~~~~~~~L~-~~g---i~i~-~g~~~~~i~~~d~vV~spgi~~ 78 (474)
T Consensus 10 l~~~~vlVIGaG~~~~~-~~~~L~~~g~~~i~v~nRt~-~ka~~la~~~~~~~~~~~~~~~l~~~l~~~DivI~aT~s~~ 87 (134)
T pfam01488 10 LKGKKVLLIGAGEMARL-AAKHLLSKGAKKITIANRTL-EKAKELAEEFGGEEVEALPLDELEELLAEADIVISATSAPT 87 (134)
T ss_pred CCCCEEEEECCCHHHHH-HHHHHHHCCCCEEEEECCCH-HHHHHHHHHCCCCCEEEEECHHHHHHHHHCCEEEEECCCCC
T ss_conf 14898999996099999-99999975998899954757-89999999849972589851354413631999999259997