HHsearch alignment for GI: 254781096 and conserved domain: pfam01946

Probab=93.81  E-value=0.1  Score=30.81  Aligned_cols=68  Identities=22%  Similarity=0.139  Sum_probs=41.5

Q ss_pred             EEEEEEECHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCEEEECCCHHHCCCCCEEEECCCCCCCCHHHHHHHH
Q ss_conf             07999461460878999999879869996078998899999889889967997886889899988898999988999997
Q gi|254781096|r    9 PIHFVGIGGIGMSGIAEVLHNTGHQVQGSDVILGPNVQRLHKQGIKVSIGHKVENIDNAEILVLSTAIDKDNVECIAARE   88 (474)
Q Consensus         9 ~i~~iGigG~G~s~lA~~l~~~G~~V~g~D~~~~~~~~~L~~~gi~i~~g~~~~~i~~~d~vV~spgi~~~~~~l~~a~~   88 (474)
T Consensus        19 DV~IVGaGpsGL~a-A~~LAk~g~KV~i~E~~ls~--------GGG~WgGG--mlf--n~ivv~~-------~a~~iLde   78 (229)
T pfam01946        19 DVVIVGAGPSGLTA-AYYLAKKGLKVAIIERSLSP--------GGGAWGGG--MLF--SAMVVRK-------PADEFLDE   78 (229)
T ss_pred             CEEEECCCCHHHHH-HHHHHHCCCEEEEEECCCCC--------CCCCCCCC--CCC--CCEEECC-------HHHHHHHH
T ss_conf             88998878179999-99998789859999645268--------88620201--225--6337641-------38999997


Q ss_pred             CCCCEEEH
Q ss_conf             79949953
Q gi|254781096|r   89 RNIPIIFR   96 (474)
Q Consensus        89 ~gi~i~~~   96 (474)
T Consensus        79 ~gi~y~~~   86 (229)
T pfam01946        79 FGIRYEDE   86 (229)
T ss_pred             CCCCCEEC
T ss_conf             49952764