RPSBLAST alignment for GI: 254781096 and conserved domain: PRK14093

>gnl|CDD|184501 PRK14093, PRK14093, UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase; Provisional. Length = 479
 Score = 49.4 bits (118), Expect = 2e-06
 Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 37/248 (14%)

Query: 83  CIAARER------NIPIIFRSEMLAGLM------RCR---KSISVSGTHGKTTTT-SLIA 126
            +  R +      + P++   ++LA L       R R   K I+V+G+ GKT+T  +L  
Sbjct: 69  AVVERAQRDKFAADAPLLVVDDVLAALRDLGRAARARLEAKVIAVTGSVGKTSTKEALRG 128

Query: 127 ALLEQGKFDPTVINGGIINSYGT---------NARIGTSEWIVVEADESDGTFIRLPSDI 177
            L  QG+   +V      N +G          +AR    E  +  A E +     +   +
Sbjct: 129 VLGAQGETHASV--ASFNNHWGVPLSLARCPADARFAVFEIGMNHAGEIEPLVKMVRPHV 186

Query: 178 VVVTNIDPEHLDYYGDFNAIRAAFYKFIDNIPFYGFAVVCMDHPEVRSLIARIQNR---K 234
            ++T ++P HL+++    AI  A  +    +   G AV+  D+P+   L A  +     +
Sbjct: 187 AIITTVEPVHLEFFSGIEAIADAKAEIFTGLEPGGAAVLNRDNPQFDRLAASARAAGIAR 246

Query: 235 IITYGRHPQADIRYSNIRKYSGRSIFDVSVQGNVTKDLTVIKDLSLPLIGEHNISNACAS 294
           I+++G   +AD R  ++  ++  S     + G+      V   L +P  G H   N+ A 
Sbjct: 247 IVSFGADEKADARLLDVALHADCSAVHADILGH-----DVTYKLGMP--GRHIAMNSLAV 299

Query: 295 IAVAYKLG 302
           +A A   G
Sbjct: 300 LAAAELAG 307