HHsearch alignment for GI: 254781097 and conserved domain: COG0438
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane].
Probab=96.17 E-value=0.12 Score=30.93 Aligned_cols=110 Identities=13% Similarity=0.192 Sum_probs=68.0
Q ss_pred CCCCCCCCCC--CCHHHHHCCCEEEEC--C--CCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHC
Q ss_conf 1113454444--514443004489972--5--420233345529604875335524898999899999889889980001
Q gi|254781097|r 242 CKATLACFFK--DIERYIVEANLLICR--S--GALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENF 315 (369)
Q Consensus 242 ~~~~v~~f~~--~m~~~~~~aDlvIsr--a--G~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~ 315 (369)
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~--------~~~~~~~~~~~g~~~~~~- 327 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVG--------GIPEVVEDGETGLLVPPG- 327 (381)
T ss_pred CCEEECCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCCEEEECCCC--------CHHHHHCCCCEEEEECCC-
T ss_conf 87899177898999999972809991786445588999999849869995899--------868843069706998899-
Q ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHH
Q ss_conf 998999999999861899999999999-8527832799999999999
Q gi|254781097|r 316 LSPERLAEELCSAMKKPSCLVQMAKQV-SMKGKPQAVLMLSDLVEKL 361 (369)
Q Consensus 316 ~~~~~l~~~i~~ll~d~~~l~~m~~~~-~~~~~~~aa~~i~~~i~~l 361 (369)
T Consensus 328 -~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (381)
T COG0438 328 -DVEELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLEL 373 (381)
T ss_pred -CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf -9999999999998697999999999999999866999999999999