HHsearch alignment for GI: 254781097 and conserved domain: COG1519

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane].
Probab=99.31  E-value=5.4e-08  Score=75.38  Aligned_cols=320  Identities=15%  Similarity=0.164  Sum_probs=175.3

Q ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHCCCEE--EEEE-CHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC
Q ss_conf             7699987885256207999999999659839--9995-723767624446875168752565653312332111000121
Q gi|254781097|r    5 NVILLVAGGTGGHVFPAVALSHELKNRGYAV--YLIT-DRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA   81 (369)
Q Consensus         5 ~~ili~~gGTGGHi~palala~~L~~~g~~v--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~   81 (369)
T Consensus        50 p~vWiHaaSV-GEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~-YlP~------D----------~  111 (419)
T COG1519          50 PLVWIHAASV-GEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQ-YLPL------D----------L  111 (419)
T ss_pred             CEEEEEECCH-HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCEEEE-ECCC------C----------C
T ss_conf             8079996446-6788889999999976899878999527637999998769870899-6576------7----------6


Q ss_pred             CHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHHHCCCCCEEECCCCCCH-HH-HH--HHHHHHHHHHCCCCCC-------
Q ss_conf             1013555420344424312653210247-88862341101221532001-56-77--8899999874134322-------
Q gi|254781097|r   82 FIASLRLIKKLKPNVVVGFGGYHSISPL-LAGMILRIPSMVHEQNVIMG-KA-NR--LLSWGVQIIARGLVSS-------  149 (369)
Q Consensus        82 ~~~~~~ii~~~kPDvVi~tGGy~s~P~~-iaA~~l~iP~vihEqN~v~G-~~-nk--~l~~~a~~v~~~~~~~-------  149 (369)
T Consensus       112 ~~~v~rFl~~~~P~l~Ii~EtE-lWPnli~e~~~~~~p~~Lv--NaRLS~rS~~~y~k~~~~~~~~~~~i~li~aQse~D  188 (419)
T COG1519         112 PIAVRRFLRKWRPKLLIIMETE-LWPNLINELKRRGIPLVLV--NARLSDRSFARYAKLKFLARLLFKNIDLILAQSEED  188 (419)
T ss_pred             HHHHHHHHHHCCCCEEEEEECC-CCHHHHHHHHHCCCCEEEE--EEEECHHHHHHHHHHHHHHHHHHHHCCEEEECCHHH
T ss_conf             6889999974289879998001-3678999998769989999--423023257779877899999997423334548888


Q ss_pred             CC---CCCCCCCEEEECCC---CHHHHHHHHHHHHHHCCCCCCEEEEEECCC-CCCCHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf             22---35566732530444---324565433344331144781489863043-222102333445443232024660677
Q gi|254781097|r  150 QK---KVLLRKIIVTGNPI---RSSLIKMKDIPYQSSDLDQPFHLLVFGGSQ-GAKVFSDIVPKSIALIPEMQRKRLVIM  222 (369)
Q Consensus       150 ~~---~~~~~k~~~~G~Pv---R~~~~~~~~~~~~~~~~~~~~~ILv~GGS~-Ga~~ln~~v~~~~~~l~~~~~~~~~v~  222 (369)
T Consensus       189 ~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaSTH~GE---eei~l~~~~~l~~~~-~~~llI  264 (419)
T COG1519         189 AQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAASTHEGE---EEIILDAHQALKKQF-PNLLLI  264 (419)
T ss_pred             HHHHHHCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCH---HHHHHHHHHHHHHHC-CCCEEE
T ss_conf             9999964986138633324237787324899999998508888559995477863---889999999999638-995699


Q ss_pred             EEECCCCHHHHHH---HHHHCCCCCC---------------CCCCCCCCHHHHHCCCEEEE------CCCCHHHHHHHHH
Q ss_conf             6202551677653---2210011113---------------45444451444300448997------2542023334552
Q gi|254781097|r  223 QQVREDDKEKVQK---QYDELGCKAT---------------LACFFKDIERYIVEANLLIC------RSGALTVSEIAVI  278 (369)
Q Consensus       223 ~~~g~~~~~~~~~---~~~~~~~~~~---------------v~~f~~~m~~~~~~aDlvIs------raG~~Ti~E~~~~  278 (369)
T Consensus       265 lV--PRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN~L-Epa~~  341 (419)
T COG1519         265 LV--PRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHNPL-EPAAF  341 (419)
T ss_pred             EE--CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECHHHHHHHHHHCCEEEECCCCCCCCCCCHH-HHHHC
T ss_conf             91--5875567999999997598188613789998888689996286899997343279987744677898822-37870


Q ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC--HHHHHHHH
Q ss_conf             9604875335524898999899999889889980001998999999999861899999999999852783--27999999
Q gi|254781097|r  279 GRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKP--QAVLMLSD  356 (369)
Q Consensus       279 g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~--~aa~~i~~  356 (369)
T Consensus       342 ~~pvi~Gp~~~---N-f~ei~~~l~~~ga~~~v~~----~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~~~gal~r~l~  413 (419)
T COG1519         342 GTPVIFGPYTF---N-FSDIAERLLQAGAGLQVED----ADLLAKAVELLLADEDKREAYGRAGLEFLAQNRGALARTLE  413 (419)
T ss_pred             CCCEEECCCCC---C-HHHHHHHHHHCCCEEEECC----HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             89788777513---5-8999999986698699778----89999999997078899999999899999986779999999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254781097|r  357 LVEK  360 (369)
Q Consensus       357 ~i~~  360 (369)
T Consensus       414 ~l~~  417 (419)
T COG1519         414 ALKP  417 (419)
T ss_pred             HHHH
T ss_conf             7551