HHsearch alignment for GI: 254781097 and conserved domain: COG2327
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis].
Probab=95.77 E-value=0.18 Score=29.74 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=52.8
Q ss_pred CCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEHHCCCHHHHHHHHHHHHC
Q ss_conf 514443004489972542023334552960487533552489899989999988988-9980001998999999999861
Q gi|254781097|r 252 DIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGA-KVITENFLSPERLAEELCSAMK 330 (369)
Q Consensus 252 ~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a-~~i~~~~~~~~~l~~~i~~ll~ 330 (369)
T Consensus 278 ~~~~~l~~~dl~Vg~R~HsaI-~al~~g~p~i~i~Y-------~~K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~~~ 349 (385)
T COG2327 278 ELGGILAACDLIVGMRLHSAI-MALAFGVPAIAIAY-------DPKVRGLMQDLGLPGFAIDIDPLDAEILSAVVLERLT 349 (385)
T ss_pred HHHHHHCCCCEEEEEHHHHHH-HHHHCCCCEEEEEE-------CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 988775157459862168999-99865997589860-------5777899997299752224778756778999999973
Q ss_pred -CHHHHHH
Q ss_conf -8999999
Q gi|254781097|r 331 -KPSCLVQ 337 (369)
Q Consensus 331 -d~~~l~~ 337 (369)
T Consensus 350 ~~~~~~~~ 357 (385)
T COG2327 350 KLDELRER 357 (385)
T ss_pred CCHHHHHH
T ss_conf 45877765