HHsearch alignment for GI: 254781097 and conserved domain: COG2327

>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis].
Probab=95.77  E-value=0.18  Score=29.74  Aligned_cols=78  Identities=15%  Similarity=0.161  Sum_probs=52.8

Q ss_pred             CCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEHHCCCHHHHHHHHHHHHC
Q ss_conf             514443004489972542023334552960487533552489899989999988988-9980001998999999999861
Q gi|254781097|r  252 DIERYIVEANLLICRSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGA-KVITENFLSPERLAEELCSAMK  330 (369)
Q Consensus       252 ~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a-~~i~~~~~~~~~l~~~i~~ll~  330 (369)
T Consensus       278 ~~~~~l~~~dl~Vg~R~HsaI-~al~~g~p~i~i~Y-------~~K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~~~  349 (385)
T COG2327         278 ELGGILAACDLIVGMRLHSAI-MALAFGVPAIAIAY-------DPKVRGLMQDLGLPGFAIDIDPLDAEILSAVVLERLT  349 (385)
T ss_pred             HHHHHHCCCCEEEEEHHHHHH-HHHHCCCCEEEEEE-------CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             988775157459862168999-99865997589860-------5777899997299752224778756778999999973


Q ss_pred             -CHHHHHH
Q ss_conf             -8999999
Q gi|254781097|r  331 -KPSCLVQ  337 (369)
Q Consensus       331 -d~~~l~~  337 (369)
T Consensus       350 ~~~~~~~~  357 (385)
T COG2327         350 KLDELRER  357 (385)
T ss_pred             CCHHHHHH
T ss_conf             45877765