HHsearch alignment for GI: 254781097 and conserved domain: COG4641
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=95.73 E-value=0.19 Score=29.65 Aligned_cols=99 Identities=16% Similarity=0.138 Sum_probs=62.7
Q ss_pred CCHHHHHCCCEE--EEC-----CC---CHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHH
Q ss_conf 514443004489--972-----54---20233345529604875335524898999899999889889980001998999
Q gi|254781097|r 252 DIERYIVEANLL--ICR-----SG---ALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERL 321 (369)
Q Consensus 252 ~m~~~~~~aDlv--Isr-----aG---~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l 321 (369)
T Consensus 250 ~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~---------~~e~~f~pgk~~iv~~---d~kdl 317 (373)
T COG4641 250 GVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWK---------DLEKFFKPGKDIIVYQ---DSKDL 317 (373)
T ss_pred HHHHCCCCCCEEEEECHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHH---------HHHHHCCCCHHEEEEC---CHHHH
T ss_conf 00000355443564137888761478505688876158750154278---------8987259860258963---78999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHH
Q ss_conf 999999861899999999999852--78327999999999999
Q gi|254781097|r 322 AEELCSAMKKPSCLVQMAKQVSMK--GKPQAVLMLSDLVEKLA 362 (369)
Q Consensus 322 ~~~i~~ll~d~~~l~~m~~~~~~~--~~~~aa~~i~~~i~~la 362 (369)
T Consensus 318 ~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~ 360 (373)
T COG4641 318 KEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIA 360 (373)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf 9999998448306899998669999874327888999999999