HHsearch alignment for GI: 254781097 and conserved domain: KOG3339

>KOG3339 consensus.
Probab=97.71  E-value=0.0001  Score=52.44  Aligned_cols=152  Identities=18%  Similarity=0.221  Sum_probs=91.2

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE-E--CHHHHH----HHCCCCC--CCEEEEECCCCCCCCHHHHHHHHH
Q ss_conf             699987885256207999999999659839999-5--723767----6244468--751687525656533123321110
Q gi|254781097|r    6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLI-T--DRRARS----FITDFPA--DSIYEIVSSQVRFSNPFVFWNSLV   76 (369)
Q Consensus         6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~-~--~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~   76 (369)
T Consensus        40 ~~lVvlG-SGGHT~EMlrLl~~l~~~y~~r~yI~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipR---sReVgQS~ltSv~  115 (211)
T KOG3339          40 STLVVLG-SGGHTGEMLRLLEALQDLYSPRSYIAADTDEMSEQKARSFELSLAHCKAKNYEIPR---SREVGQSWLTSVF  115 (211)
T ss_pred             EEEEEEC-CCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHEECCH---HHHHHHHHHHHHH
T ss_conf             0899986-89768999999998875318537999658354289987331133336601134550---3564234540199


Q ss_pred             HCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCC-----CEEECC-CC---CCHHHHHHHHHHHHHHHCCCC
Q ss_conf             001211013555420344424312653210247888623411-----012215-32---001567788999998741343
Q gi|254781097|r   77 ILWKAFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIP-----SMVHEQ-NV---IMGKANRLLSWGVQIIARGLV  147 (369)
Q Consensus        77 ~~~~~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP-----~vihEq-N~---v~G~~nk~l~~~a~~v~~~~~  147 (369)
T Consensus       116 Tti~all~s~~lv~RirPdlil~NGPGTCv~i~~~a~l~~iL~~~~~~IvyvES~cRV~tlSlsGkiL~~~~d~Fivqw~  195 (211)
T KOG3339         116 TTIWALLQSFVLVWRIRPDLILCNGPGTCVPICLSAYLMEILGLKSSHIVYVESICRVKTLSLSGKILYPVVDLFIVQWP  195 (211)
T ss_pred             HHHHHHHHHHEEEEECCCCEEEECCCCCEEHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCEEEHHHHHHHHHHHH
T ss_conf             99999997723789558878997799817389999999998476751899986345760455575050668889987429


Q ss_pred             CCCCCCCCCCCEEEEC
Q ss_conf             2222355667325304
Q gi|254781097|r  148 SSQKKVLLRKIIVTGN  163 (369)
Q Consensus       148 ~~~~~~~~~k~~~~G~  163 (369)
T Consensus       196 ~L~~ky~--~~~~~g~  209 (211)
T KOG3339         196 ALATKYL--RVKYFGI  209 (211)
T ss_pred             HHHHHCC--CCEEEEE
T ss_conf             9998523--5200133