HHsearch alignment for GI: 254781097 and conserved domain: PRK05749
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed.
Probab=99.60 E-value=4e-11 Score=97.28 Aligned_cols=321 Identities=15% Similarity=0.147 Sum_probs=179.7
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCC--CEEEEEE-CHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 7699987885256207999999999659--8399995-723767624446875168752565653312332111000121
Q gi|254781097|r 5 NVILLVAGGTGGHVFPAVALSHELKNRG--YAVYLIT-DRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKA 81 (369)
Q Consensus 5 ~~ili~~gGTGGHi~palala~~L~~~g--~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (369)
T Consensus 50 ~~IW~HaaS-vGE~~~~~pli~~l~~~~p~~~ilvTt~T~sg~~~~~~~~~~~~~~~y-l------P~----------D~ 111 (423)
T PRK05749 50 PLIWFHAVS-VGETRAAIPLIRALRKRYPDLPILVTTMTPTGSERAKALFGDDVEHVY-L------PY----------DL 111 (423)
T ss_pred CEEEEEECC-HHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEE-E------CC----------CC
T ss_conf 859998287-989999999999999629997499983783099999986689737999-2------24----------78
Q ss_pred CHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHHHCCCCCEEECCCCCCHH-H-H--HHHHHHHHHHHCCCCC-------C
Q ss_conf 1013555420344424312653210247-888623411012215320015-6-7--7889999987413432-------2
Q gi|254781097|r 82 FIASLRLIKKLKPNVVVGFGGYHSISPL-LAGMILRIPSMVHEQNVIMGK-A-N--RLLSWGVQIIARGLVS-------S 149 (369)
Q Consensus 82 ~~~~~~ii~~~kPDvVi~tGGy~s~P~~-iaA~~l~iP~vihEqN~v~G~-~-n--k~l~~~a~~v~~~~~~-------~ 149 (369)
T Consensus 112 ~~~~~rfl~~~~P~~~i~~E~E-iWPnli~~~~~~~Ip~~li--NaR~s~~S~~~y~~~~~~~~~~l~~~~~i~~qs~~~ 188 (423)
T PRK05749 112 PFAVRRFLRFWRPKLLIIMETE-LWPNLIAEAKKRGIPLVLA--NARLSERSFKRYAKFKRFYRLLFKNIDLVLAQSEED 188 (423)
T ss_pred HHHHHHHHHHHCCCEEEEEECC-CCHHHHHHHHHCCCCEEEE--CCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHH
T ss_conf 7999999997398879986203-1088999996278866765--251163367666766999999997427665269999
Q ss_pred CC---CC-CCCCCEEEECCCCHHHH----HHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 22---35-56673253044432456----543334433114478148986304322210233344544323202466067
Q gi|254781097|r 150 QK---KV-LLRKIIVTGNPIRSSLI----KMKDIPYQSSDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVI 221 (369)
Q Consensus 150 ~~---~~-~~~k~~~~G~PvR~~~~----~~~~~~~~~~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v 221 (369)
T Consensus 189 ~~r~~~lG~~~~v~v~Gnl-Kfd~~~~~~~~~~~~~~~~~~~~~~-v~v-agSth~~EE-~iil~~~~~l~~~~-~~~~l 263 (423)
T PRK05749 189 AERFLALGAKNEVTVTGNL-KFDIEIPPELAARAAALRRQLPNRP-VWI-AASTHEGEE-ELVLDAHQALLKQF-PNLLL 263 (423)
T ss_pred HHHHHHCCCCCCEEECCCC-CCCCCCCHHHHHHHHHHHHHHCCCC-EEE-EEECCHHHH-HHHHHHHHHHHHCC-CCCEE
T ss_conf 9999975999743876863-2245787110788999999818996-899-992887699-99999999997408-78289
Q ss_pred EEEECCCCH---HHHHHHHHHCCCC---------------CCCCCCCCCCHHHHHCCCEEEE------CCCCHHHHHHHH
Q ss_conf 762025516---7765322100111---------------1345444451444300448997------254202333455
Q gi|254781097|r 222 MQQVREDDK---EKVQKQYDELGCK---------------ATLACFFKDIERYIVEANLLIC------RSGALTVSEIAV 277 (369)
Q Consensus 222 ~~~~g~~~~---~~~~~~~~~~~~~---------------~~v~~f~~~m~~~~~~aDlvIs------raG~~Ti~E~~~ 277 (369)
T Consensus 264 Iia--PRHpeR~~~i~~~l~~~gl~~~~~S~~~~~~~~~~Vli~Dt~GeL~~~Y~~a~iafvGGsf~~~GGHN~l-Epa~ 340 (423)
T PRK05749 264 ILV--PRHPERFKEVEELLKKAGLSYVRRSQGEAPSADTDVLLGDTMGELGLLYAIADIAFVGGSLVKIGGHNPL-EPAA 340 (423)
T ss_pred EEE--CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCEEEECCCCCCCCCCCHH-HHHH
T ss_conf 994--7877679999999996799779827999999887299988887588999857878982776888995979-9998
Q ss_pred HCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC--CCCHHHHHHH
Q ss_conf 29604875335524898999899999889889980001998999999999861899999999999852--7832799999
Q gi|254781097|r 278 IGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMK--GKPQAVLMLS 355 (369)
Q Consensus 278 ~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~--~~~~aa~~i~ 355 (369)
T Consensus 341 ~g~pvi~GP~---~~nf-~e~~~~L~~~g~~~~v~----~~~eL~~~~~~ll~~~~~~~~~~~~a~~~v~~~~Gat~r~~ 412 (423)
T PRK05749 341 FGVPVISGPH---TFNF-KEIFERLLQAGAAIQVE----DAEDLAKAVSSLLTDPDAREAMGEAGVAFLKQNRGALQRTL 412 (423)
T ss_pred CCCCEEECCC---CCCH-HHHHHHHHHCCCEEEEC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 3998899938---3277-99999999789958968----99999999999976999999999999999997847999999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254781097|r 356 DLVEKLA 362 (369)
Q Consensus 356 ~~i~~la 362 (369)
T Consensus 413 ~~i~~~L 419 (423)
T PRK05749 413 QLLKPYL 419 (423)
T ss_pred HHHHHHC
T ss_conf 9999763