HHsearch alignment for GI: 254781097 and conserved domain: PRK10084

Probab=90.52  E-value=1.4  Score=23.57  Aligned_cols=78  Identities=17%  Similarity=0.243  Sum_probs=37.5

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHH-----HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCC
Q ss_conf             69998788525620799999999965983999957237-----6762444687516875256565331233211100012
Q gi|254781097|r    6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRA-----RSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWK   80 (369)
Q Consensus         6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   80 (369)
T Consensus         2 kILVTG-g~G-FI--Gs~l~~~Ll~~~~~~v~~vd~~~~~~~~~~~-~~~~~~~~~~~~~~D----------------i~   60 (352)
T PRK10084          2 KILVTG-GAG-FI--GSAVVRHIINNTQDSVVNVDKLTYAGNLESL-ADVSDSERYVFEHAD----------------IC   60 (352)
T ss_pred             EEEEEC-CHH-HH--HHHHHHHHHHCCCCEEEEEECCCCCCCHHHH-HHHHCCCCCEEEECC----------------CC
T ss_conf             799975-100-89--9999999997799889998479876778888-876308971799856----------------78


Q ss_pred             CCHHHHHHHHHCCCCEEEECCCCC
Q ss_conf             110135554203444243126532
Q gi|254781097|r   81 AFIASLRLIKKLKPNVVVGFGGYH  104 (369)
Q Consensus        81 ~~~~~~~ii~~~kPDvVi~tGGy~  104 (369)
T Consensus        61 d~~~l~~~~~~~~~D~ViHlAA~~   84 (352)
T PRK10084         61 DRAELDRIFAQHQPDAVMHLAAES   84 (352)
T ss_pred             CHHHHHHHHHHHCCCEEEECCCCC
T ss_conf             999999999973999999977346