HHsearch alignment for GI: 254781097 and conserved domain: PRK12377
>PRK12377 putative replication protein; Provisional.
Probab=93.00 E-value=0.3 Score=28.28 Aligned_cols=41 Identities=12% Similarity=0.150 Sum_probs=20.3
Q ss_pred CCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEE
Q ss_conf 606776202551677653221001111345444451444300448997
Q gi|254781097|r 218 RLVIMQQVREDDKEKVQKQYDELGCKATLACFFKDIERYIVEANLLIC 265 (369)
Q Consensus 218 ~~~v~~~~g~~~~~~~~~~~~~~~~~~~v~~f~~~m~~~~~~aDlvIs 265 (369)
T Consensus 129 G~sVlF~t~~dLv~~L~~a~~~g~-------~~~k~l~~l~~~dLLII 169 (248)
T PRK12377 129 GRSVIVVTVPDVMSRLHESYDNGQ-------SGEKFLQELCKVDLLVL 169 (248)
T ss_pred CCEEEEEEHHHHHHHHHHHHHCCC-------CHHHHHHHHHCCCEEEE
T ss_conf 996999889999999999998485-------09999999733898986