HHsearch alignment for GI: 254781097 and conserved domain: TIGR00236
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA , . The protein from rat liver displays both epimerase and kinase activity .; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process.
Probab=96.77 E-value=0.055 Score=33.41 Aligned_cols=325 Identities=19% Similarity=0.205 Sum_probs=171.5
Q ss_pred CCHHHHHHHHHHHHHHHHC-CCEEEEE-ECHHH-----HHHHCCCCCC-CEEEEECCCCCCCCHHHHHHHHHHCCCCCHH
Q ss_conf 8525620799999999965-9839999-57237-----6762444687-5168752565653312332111000121101
Q gi|254781097|r 13 GTGGHVFPAVALSHELKNR-GYAVYLI-TDRRA-----RSFITDFPAD-SIYEIVSSQVRFSNPFVFWNSLVILWKAFIA 84 (369)
Q Consensus 13 GTGGHi~palala~~L~~~-g~~v~~~-~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (369)
T Consensus 8 g~~p~~~~~~p~~~~~~~~p~~~~~~~~~~~h~~~~~~~~~~~~~~~~~p~~~~~~~~~-g~~~~~~~------~~~l~~ 80 (380)
T TIGR00236 8 GTRPEAIKLAPLIRALLKDPGIDWKVLHTGQHRDEEMLDQVLDLFSLPNPDYDLNIGSP-GQTLGEIT------GGLLEG 80 (380)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC-CCHHHHHH------HHHHHH
T ss_conf 67620356657899986268852256750320014678999988622575444423576-63047788------888876
Q ss_pred HHHHHHHCCCCEEEECCCCC-CHHHHHHHHHCCCCCEEECC--------CCCCHHHHHHHHH-HHHHHHCCCCCCC----
Q ss_conf 35554203444243126532-10247888623411012215--------3200156778899-9998741343222----
Q gi|254781097|r 85 SLRLIKKLKPNVVVGFGGYH-SISPLLAGMILRIPSMVHEQ--------NVIMGKANRLLSW-GVQIIARGLVSSQ---- 150 (369)
Q Consensus 85 ~~~ii~~~kPDvVi~tGGy~-s~P~~iaA~~l~iP~vihEq--------N~v~G~~nk~l~~-~a~~v~~~~~~~~---- 150 (369)
T Consensus 81 ~~~~~~~~~p~~~~~~gd~~~~~~~~l~~~~~~~~~gh~~~gl~~~~~~~p~p~~~~~~~~~~~~~~~~~p~~~~~~~l~ 160 (380)
T TIGR00236 81 LEELLLEEKPDVVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGDLYSPFPEELNRVLTGHIAKLHFAPTELAKENLL 160 (380)
T ss_pred HHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 78886414886789716621467778877765301013320111244557760567778988777642032156677776
Q ss_pred -CCCCCCCCEEEECCCCHHHHHHHHHH-----HHH-HCC-----CCCCEEEEEEC---CCC-CCCHHHHHHHHHHHHHHH
Q ss_conf -23556673253044432456543334-----433-114-----47814898630---432-221023334454432320
Q gi|254781097|r 151 -KKVLLRKIIVTGNPIRSSLIKMKDIP-----YQS-SDL-----DQPFHLLVFGG---SQG-AKVFSDIVPKSIALIPEM 214 (369)
Q Consensus 151 -~~~~~~k~~~~G~PvR~~~~~~~~~~-----~~~-~~~-----~~~~~ILv~GG---S~G-a~~ln~~v~~~~~~l~~~ 214 (369)
T Consensus 161 ~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~h~~~~~~~~~~~~~~-~~~~~~~~~~ 239 (380)
T TIGR00236 161 REGVEPGKIFVTGNTVIDALLTNLEIAEPSSPVLSEFGENYPFVPDDRVLLLTLHRRENVGNPEPLENI-LEAILEILEE 239 (380)
T ss_pred HCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEEHHHHCCCCHHHHHHH-HHHHHHHHHH
T ss_conf 305554505762205677787766542101550234225677320454446540011046760146899-9999998741
Q ss_pred CCCCCEEEEEECC--CCHHH---HHHHHHHCCCCCCC---CCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEE
Q ss_conf 2466067762025--51677---65322100111134---5444451444300448997254202333455296048753
Q gi|254781097|r 215 QRKRLVIMQQVRE--DDKEK---VQKQYDELGCKATL---ACFFKDIERYIVEANLLICRSGALTVSEIAVIGRPAILVP 286 (369)
Q Consensus 215 ~~~~~~v~~~~g~--~~~~~---~~~~~~~~~~~~~v---~~f~~~m~~~~~~aDlvIsraG~~Ti~E~~~~g~P~IlIP 286 (369)
T Consensus 240 ~-~~~~~~~p~h~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~-~~~~~~~~~~~~l~d~gg~~-~~~~~~~~p~~~~~ 315 (380)
T TIGR00236 240 F-PDVAIVFPVHPNPKVREPEFGLYKALGD-AKRVFLIEPLGYL-DFLLLLSNAYLILTDSGGLQ-EEAPSLGKPVLVLR 315 (380)
T ss_pred C-CCCEEEEECCCCCCCCHHHHHHHHHHCC-CCCEEEECCHHHH-HHHHHHHCCEEEEECCCCCC-HHHHHCCCCEEEEE
T ss_conf 2-4303566214564210023104666325-6635775513478-88887532416873477630-01121277437750
Q ss_pred CCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 35524898999899999889889980001998999999999861899999999999852783279999999999
Q gi|254781097|r 287 YPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGKPQAVLMLSDLVEK 360 (369)
Q Consensus 287 ~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~~~aa~~i~~~i~~ 360 (369)
T Consensus 316 --~~~~~------p~~~~~g~~~l~g~---~~~~~~~~~~~~l~~p~~~~~~~~~~~p~g~g~~~~~~~~~~~~ 378 (380)
T TIGR00236 316 --DTTER------PEAVEAGTNKLVGT---DKEKITKAAGRLLSDPDEYRKMSNAENPYGDGEASERIVEELLN 378 (380)
T ss_pred --CCCCC------CCHHHCCCEEEECC---CHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf --35666------42010032001046---67889999998731726788886412656774146899999860