HHsearch alignment for GI: 254781097 and conserved domain: TIGR01316
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=91.61 E-value=1.1 Score=24.26 Aligned_cols=99 Identities=19% Similarity=0.262 Sum_probs=53.4
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCC-CEEEEECCCCCCCCHHHHHHHHHHC---
Q ss_conf 887699987885256207999999999659839999572376762444687-5168752565653312332111000---
Q gi|254781097|r 3 ENNVILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPAD-SIYEIVSSQVRFSNPFVFWNSLVIL--- 78 (369)
Q Consensus 3 ~~~~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~--- 78 (369)
T Consensus 141 t~~kVAViGaGPA-----GL~cA~elAk~Gh~VtvfE-------ALhKPGGV~~YGIPefRLpKei~~~E~k~LkklGv~ 208 (462)
T TIGR01316 141 TKKKVAVIGAGPA-----GLACASELAKKGHEVTVFE-------ALHKPGGVLAYGIPEFRLPKEIVETEVKKLKKLGVK 208 (462)
T ss_pred CCCEEEEECCCCH-----HHHHHHHHHHCCCEEEEEE-------ECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCEE
T ss_conf 8877999846821-----4688999974798699997-------148998567536888548757889888876326637
Q ss_pred -CCCCH--H---HHHHHHHCCCCEEE-ECCCCCCHHHHHHHHHCCCCCE
Q ss_conf -12110--1---35554203444243-1265321024788862341101
Q gi|254781097|r 79 -WKAFI--A---SLRLIKKLKPNVVV-GFGGYHSISPLLAGMILRIPSM 120 (369)
Q Consensus 79 -~~~~~--~---~~~ii~~~kPDvVi-~tGGy~s~P~~iaA~~l~iP~v 120 (369)
T Consensus 209 fr~~~lvGkt~TL~eL~~~YGfDAVFIgtG--AG~p-----kl~NipG~ 250 (462)
T TIGR01316 209 FRTDYLVGKTVTLEELLEKYGFDAVFIGTG--AGLP-----KLLNIPGE 250 (462)
T ss_pred EEECCEECCCHHHHHHHHHCCCCEEEEEEC--CCCC-----EECCCCCH
T ss_conf 994437505112888887519707999506--8987-----00167843