HHsearch alignment for GI: 254781097 and conserved domain: TIGR03088
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.78 E-value=6.5e-16 Score=130.77 Aligned_cols=333 Identities=16% Similarity=0.153 Sum_probs=185.2
Q ss_pred CEEEE-ECC-CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCC--CCCCCEEEEECCCCCCCCHHHHHHHHHHCCC
Q ss_conf 76999-878-8525620799999999965983999957237676244--4687516875256565331233211100012
Q gi|254781097|r 5 NVILL-VAG-GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITD--FPADSIYEIVSSQVRFSNPFVFWNSLVILWK 80 (369)
Q Consensus 5 ~~ili-~~g-GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (369)
T Consensus 2 ~~IlhiI~~l~~GGaE~~~~~l~~~l~~~~~~~~vi~~~~~~~~~~~~~~~~v~~~~l~~~~------~~~~~------- 68 (374)
T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYALHKQP------GKDVA------- 68 (374)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCC------CCCHH-------
T ss_conf 88999908999982799999999978875993999997898457899986898899907887------64799-------
Q ss_pred CCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCC-----CCHH--H----HHHHHHHHHHHHCCCCCC
Q ss_conf 1101355542034442431265321024788862341101221532-----0015--6----778899999874134322
Q gi|254781097|r 81 AFIASLRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNV-----IMGK--A----NRLLSWGVQIIARGLVSS 149 (369)
Q Consensus 81 ~~~~~~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~-----v~G~--~----nk~l~~~a~~v~~~~~~~ 149 (369)
T Consensus 69 ~~~~l~~li~~~kpDiIh~~-~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~k~~~~~~~~~i~vs~~~ 147 (374)
T TIGR03088 69 VYPQLYRLLRQLRPDIVHTR-NLAALEAQLPAALAGVPARIHGEHGRDVFDLDGSNWKYRWLRRLYRPLIHHYVAVSRDL 147 (374)
T ss_pred HHHHHHHHHHHHCCCEEEEC-CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCHHH
T ss_conf 99999999998398489863-61169999999984998899960787543743105899999999998568899915899
Q ss_pred C------CCCCCCCCEEEECCCCHHHHHHHHHH----HHHH-CCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHH---
Q ss_conf 2------23556673253044432456543334----4331-14478148986304322-21023334454432320---
Q gi|254781097|r 150 Q------KKVLLRKIIVTGNPIRSSLIKMKDIP----YQSS-DLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEM--- 214 (369)
Q Consensus 150 ~------~~~~~~k~~~~G~PvR~~~~~~~~~~----~~~~-~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~--- 214 (369)
T Consensus 148 ~~~~~~~~~~~~~ki~~I~Ngid~~~f~~~~~~~~~~~~~~~~~~~~~-~i~~vgRl~~~Kg~~-~li~a~~~l~~~~~~ 225 (374)
T TIGR03088 148 EDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADESV-VVGTVGRLQAVKDQP-TLVRAFALLVRQLPE 225 (374)
T ss_pred HHHHHHHHCCCHHHEEEECCCCCHHHCCCCCCCHHHHHHHCCCCCCCE-EEEEEEECEEECCHH-HHHHHHHHHHHHCCC
T ss_conf 999998709987898996687765215877310677654315898776-999966340307879-999999999986777
Q ss_pred CCCCCEEEEEECCCCHHHHHHHHHHCCC--CCCCCCCCCCCHHHHHCCCEEEECC---C-CHHHHHHHHHCCCEEEEECC
Q ss_conf 2466067762025516776532210011--1134544445144430044899725---4-20233345529604875335
Q gi|254781097|r 215 QRKRLVIMQQVREDDKEKVQKQYDELGC--KATLACFFKDIERYIVEANLLICRS---G-ALTVSEIAVIGRPAILVPYP 288 (369)
Q Consensus 215 ~~~~~~v~~~~g~~~~~~~~~~~~~~~~--~~~v~~f~~~m~~~~~~aDlvIsra---G-~~Ti~E~~~~g~P~IlIP~p 288 (369)
T Consensus 226 ~~~~~~l~i~G~G~~~~~l~~~i~~~~l~~~v~f~G~~~~~~~~~~~~Di~v~~S~~EGf~~~llEAma~g~PvIasdv- 304 (374)
T TIGR03088 226 GAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAV- 304 (374)
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCCCEEECCC-
T ss_conf 6688899998177659999999997187775853787468999999639003134434467799999975997999189-
Q ss_pred CCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHH
Q ss_conf 52489899989999988988998000199899999999986189999999999985278-3279999999999998
Q gi|254781097|r 289 HSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKGK-PQAVLMLSDLVEKLAH 363 (369)
Q Consensus 289 ~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~~-~~aa~~i~~~i~~la~ 363 (369)
T Consensus 305 ---gg----~~eii~~~~~G~l~~~~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~v~~~Fs~~~~~~~~~~lY~ 371 (374)
T TIGR03088 305 ---GG----NPELVQHGVTGALVPPG--DAVALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYAGLYD 371 (374)
T ss_pred ---CC----HHHHHCCCCCEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf ---98----18986179868997899--999999999999779999999999999999987899999999999999