HHsearch alignment for GI: 254781097 and conserved domain: cd03798
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.76 E-value=7.2e-16 Score=130.45 Aligned_cols=333 Identities=15% Similarity=0.155 Sum_probs=176.7
Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCC-CCCEEEEECCCCCCCCHHH-HHHHHHHCCCCCHHHHHHHHH
Q ss_conf 52562079999999996598399995723767624446-8751687525656533123-321110001211013555420
Q gi|254781097|r 14 TGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFP-ADSIYEIVSSQVRFSNPFV-FWNSLVILWKAFIASLRLIKK 91 (369)
Q Consensus 14 TGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~ii~~ 91 (369)
T Consensus 13 ~GG~e~~~~~la~~L~~~G~~V~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~ 91 (377)
T cd03798 13 NGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYLLAARALLK-LLKLKR 91 (377)
T ss_pred CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHC
T ss_conf 8949999999999999779969999537987531231257520003445455444331046677899999999-999746
Q ss_pred CCCCEEEECCCCCC-HHHHHHHHHCCCCCEE--ECCCCCCHH-------HHHHHHHHHHHHHCCCCCCCC-----CCCCC
Q ss_conf 34442431265321-0247888623411012--215320015-------677889999987413432222-----35566
Q gi|254781097|r 92 LKPNVVVGFGGYHS-ISPLLAGMILRIPSMV--HEQNVIMGK-------ANRLLSWGVQIIARGLVSSQK-----KVLLR 156 (369)
Q Consensus 92 ~kPDvVi~tGGy~s-~P~~iaA~~l~iP~vi--hEqN~v~G~-------~nk~l~~~a~~v~~~~~~~~~-----~~~~~ 156 (369)
T Consensus 92 ~~~DvI~~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~ 171 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKRLLRALLRRALRRADAVIAVSEALADELKALGIDPE 171 (377)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCC
T ss_conf 99868997884067999999999739988999677414310231689999999998589999889899999998589965
Q ss_pred CCEEEECCCCHHHHHHHHHH-HHHHCC-CCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHH
Q ss_conf 73253044432456543334-433114-478148986304322-210233344544323202466067762025516776
Q gi|254781097|r 157 KIIVTGNPIRSSLIKMKDIP-YQSSDL-DQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQVREDDKEKV 233 (369)
Q Consensus 157 k~~~~G~PvR~~~~~~~~~~-~~~~~~-~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~~ 233 (369)
T Consensus 172 ~i~vi~ngid~~~f~~~~~~~~~~~~~~~~~~-~i~~~Grl~~~Kg~~-~li~a~~~l~~~-~~~~~l~i~G~g~~~~~l 248 (377)
T cd03798 172 KVTVIPNGVDTERFSPADRAEARKLGLPEDKK-VILFVGRLVPRKGID-YLIEALARLLKK-RPDVHLVIVGDGPLREAL 248 (377)
T ss_pred CEEEECCCCCHHHCCCCCHHHHHHHCCCCCCE-EEEEEEECCCCCCCH-HHHHHHHHHHHH-CCCCEEEECCCCHHHHHH
T ss_conf 59998897578754988777898608999985-999982452001828-999999998874-888522432682788899
Q ss_pred HHHHHHC--CCCCCCCCCCC--CCHHHHHCCCEEEECC----CCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 5322100--11113454444--5144430044899725----42023334552960487533552489899989999988
Q gi|254781097|r 234 QKQYDEL--GCKATLACFFK--DIERYIVEANLLICRS----GALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEG 305 (369)
Q Consensus 234 ~~~~~~~--~~~~~v~~f~~--~m~~~~~~aDlvIsra----G~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~ 305 (369)
T Consensus 249 ~~~~~~~~l~~~v~~~g~v~~~~~~~~~~~adv~v~pS~~E~~~~~~lEama~G~PvI~~~~g--------g~~e~i~~~ 320 (377)
T cd03798 249 EALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGLPVVATDVG--------GIPEIITDG 320 (377)
T ss_pred HHHHHHCCCCCEEEECCCEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCC--------CHHHHHCCC
T ss_conf 999886188736986052100101013333774137855765125589999759979995899--------869985179
Q ss_pred CCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHH
Q ss_conf 98899800019989999999998618999999999998527-8327999999999999
Q gi|254781097|r 306 GGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKG-KPQAVLMLSDLVEKLA 362 (369)
Q Consensus 306 G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~-~~~aa~~i~~~i~~la 362 (369)
T Consensus 321 ~~G~~~~~~--~~~~l~~~i~~l~~~~~~--~~~~~~~~~~~~~fs~~~~~~~~~~~y 374 (377)
T cd03798 321 ENGLLVPPG--DPEALAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELY 374 (377)
T ss_pred CEEEEECCC--CHHHHHHHHHHHHCCHHH--HHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 749997999--999999999999879999--999999999998699999999999998