HHsearch alignment for GI: 254781097 and conserved domain: cd03808
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.85 E-value=2.4e-19 Score=154.75 Aligned_cols=329 Identities=15% Similarity=0.174 Sum_probs=181.6
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHH
Q ss_conf 69998788525620799999999965983999957237676244468751687525656533123321110001211013
Q gi|254781097|r 6 VILLVAGGTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIAS 85 (369)
Q Consensus 6 ~ili~~gGTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 85 (369)
T Consensus 1 kil~i~~~~GG~e~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~gv~~~~~~~~~-~~~~~~~-------~~~~~~~l 72 (359)
T cd03808 1 KILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEALGVKVIPIPLDR-RGINPFK-------DLKALLRL 72 (359)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHCCCEEEEECCCC-CCCCHHH-------HHHHHHHH
T ss_conf 989997587659999999999999769999999707987433675798899927877-7788699-------99999999
Q ss_pred HHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCC------CCHHHH-------HHHHHHHHHHHCCCCCCCC-
Q ss_conf 55542034442431265321024788862341101221532------001567-------7889999987413432222-
Q gi|254781097|r 86 LRLIKKLKPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNV------IMGKAN-------RLLSWGVQIIARGLVSSQK- 151 (369)
Q Consensus 86 ~~ii~~~kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~------v~G~~n-------k~l~~~a~~v~~~~~~~~~- 151 (369)
T Consensus 73 ~~~i~~~~pDvIh~~~~~~~~~~~la~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ii~~S~~~~~~ 152 (359)
T cd03808 73 YRLLRKERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDL 152 (359)
T ss_pred HHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHH
T ss_conf 99999849989999065135789999986499869999567740124547789999999999996499999949899999
Q ss_pred ----C-CCCC-CCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf ----3-5566-73253044432456543334433114478148986304322-210233344544323202466067762
Q gi|254781097|r 152 ----K-VLLR-KIIVTGNPIRSSLIKMKDIPYQSSDLDQPFHLLVFGGSQGA-KVFSDIVPKSIALIPEMQRKRLVIMQQ 224 (369)
Q Consensus 152 ----~-~~~~-k~~~~G~PvR~~~~~~~~~~~~~~~~~~~~~ILv~GGS~Ga-~~ln~~v~~~~~~l~~~~~~~~~v~~~ 224 (369)
T Consensus 153 ~~~~~~~~~~~~~~i~~~gvd~~~~~~~----~~~~~~~~~-~i~~vGrl~~~Kg~~-~li~a~~~l~~~~-~~~~l~iv 225 (359)
T cd03808 153 ALKLGIIKKKKTVLIPGSGVDLDRFSPS----PEPIPEDDP-VFLFVARLLKDKGID-ELLEAARILKAKG-PNVRLLLV 225 (359)
T ss_pred HHHHCCCCCCCEEEECCCCCCHHHCCCC----CCCCCCCCE-EEEEECCCCHHCCHH-HHHHHHHHHHHHC-CCCEEEEE
T ss_conf 9983799746089977997686653866----546898984-999980463220739-9999999998639-98089997
Q ss_pred ECCCCHHHHH-HHHH--HCCCCCCCCCCCCCCHHHHHCCCEEEECC----CCHHHHHHHHHCCCEEEEECCCCCCCHHHH
Q ss_conf 0255167765-3221--00111134544445144430044899725----420233345529604875335524898999
Q gi|254781097|r 225 VREDDKEKVQ-KQYD--ELGCKATLACFFKDIERYIVEANLLICRS----GALTVSEIAVIGRPAILVPYPHSVDQDQLH 297 (369)
Q Consensus 225 ~g~~~~~~~~-~~~~--~~~~~~~v~~f~~~m~~~~~~aDlvIsra----G~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~ 297 (369)
T Consensus 226 G~g~~~~~~~~~~~~~~~~~~~v~f~G~~~~~~~~~~~~di~v~pS~~Egf~~~~lEAma~G~PvI~s~~g----g---- 297 (359)
T cd03808 226 GDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADVFVLPSYREGLPRVLLEAMAMGRPVIATDVP----G---- 297 (359)
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEECCCC----C----
T ss_conf 68872589999999971889869980757789999996021578752135784289998669989994899----7----
Q ss_pred HHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCC-CCHHHHHHHHHHH
Q ss_conf 8999998898899800019989999999998618999999999998527-8327999999999
Q gi|254781097|r 298 NAYYLQEGGGAKVITENFLSPERLAEELCSAMKKPSCLVQMAKQVSMKG-KPQAVLMLSDLVE 359 (369)
Q Consensus 298 NA~~l~~~G~a~~i~~~~~~~~~l~~~i~~ll~d~~~l~~m~~~~~~~~-~~~aa~~i~~~i~ 359 (369)
T Consensus 298 ~~e~i~~~~~G~l~~~~--d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~l 358 (359)
T cd03808 298 CREAVIDGVNGFLVPPG--DAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHCCCCEEEECCC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 28886079818998999--99999999999988999999999999999998779999999974