HHsearch alignment for GI: 254781097 and conserved domain: cd03819
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.76 E-value=2e-16 Score=134.34 Aligned_cols=310 Identities=15% Similarity=0.109 Sum_probs=173.3
Q ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHC
Q ss_conf 85256207999999999659839999572376762444687516875256565331233211100012110135554203
Q gi|254781097|r 13 GTGGHVFPAVALSHELKNRGYAVYLITDRRARSFITDFPADSIYEIVSSQVRFSNPFVFWNSLVILWKAFIASLRLIKKL 92 (369)
Q Consensus 13 GTGGHi~palala~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ii~~~ 92 (369)
T Consensus 8 ~~GGaE~~~~~La~~L~~~Gh~V~vi~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~-------~~~~~~l~~~l~~~ 77 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRLVAELEAEGSRHIKL---PFISKNPLRI-------LLNVARLRRLIREE 77 (355)
T ss_pred CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCEEEEE---CCCCCCCHHH-------HHHHHHHHHHHHHH
T ss_conf 9941799999999999987998999968998715566349669991---7877882899-------99999999999996
Q ss_pred CCCEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCH--HHHHHHHHHHHHH-HCCCCCCC------CCCCCCCCEEEEC
Q ss_conf 4442431265321024788862341101221532001--5677889999987-41343222------2355667325304
Q gi|254781097|r 93 KPNVVVGFGGYHSISPLLAGMILRIPSMVHEQNVIMG--KANRLLSWGVQII-ARGLVSSQ------KKVLLRKIIVTGN 163 (369)
Q Consensus 93 kPDvVi~tGGy~s~P~~iaA~~l~iP~vihEqN~v~G--~~nk~l~~~a~~v-~~~~~~~~------~~~~~~k~~~~G~ 163 (369)
T Consensus 78 ~~Divh~h~~~~~~~~~~a~~~~~~~~i~t~H~~~~~~~~~~~~~~-~~~~~i~~S-~~~~~~~~~~~~~~~~ki~vI~n 155 (355)
T cd03819 78 KVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNFRYNAIMA-RGDRVIAVS-NFIADHIRENYGVDPDRIRVIPR 155 (355)
T ss_pred CCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH-HCCEEEEEC-HHHHHHHHHHHCCCHHHEEEECC
T ss_conf 9989997786449999999985399789996787740679999997-279899945-89999999973998789999788
Q ss_pred CCCHHHHHHHH-------HHHHHHCCCCCCEEEEEECCCC-CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCC----HH
Q ss_conf 44324565433-------3443311447814898630432-221023334454432320246606776202551----67
Q gi|254781097|r 164 PIRSSLIKMKD-------IPYQSSDLDQPFHLLVFGGSQG-AKVFSDIVPKSIALIPEMQRKRLVIMQQVREDD----KE 231 (369)
Q Consensus 164 PvR~~~~~~~~-------~~~~~~~~~~~~~ILv~GGS~G-a~~ln~~v~~~~~~l~~~~~~~~~v~~~~g~~~----~~ 231 (369)
T Consensus 156 gid~~~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~vGRl~~~Kg~-~~li~a~~~l~~~~-~~~~l~i~G~g~~~~~~~~ 233 (355)
T cd03819 156 GVDLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQ-EVFIEALARLKKDD-PDVHLLIVGDAQGRRFYYA 233 (355)
T ss_pred CCCHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCH-HHHHHHHHHHHHHC-CCEEEEEEECCCCCHHHHH
T ss_conf 756542387778778899999862899998799996166544576-99999999998648-9979999707864168999
Q ss_pred HHHHHHHHC--CCCCCCCCCCCCCHHHHHCCCEEE--E-C-CC-CHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 765322100--111134544445144430044899--7-2-54-202333455296048753355248989998999998
Q gi|254781097|r 232 KVQKQYDEL--GCKATLACFFKDIERYIVEANLLI--C-R-SG-ALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQE 304 (369)
Q Consensus 232 ~~~~~~~~~--~~~~~v~~f~~~m~~~~~~aDlvI--s-r-aG-~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~ 304 (369)
T Consensus 234 ~~~~~~~~~~l~~~v~f~G~~~d~~~~~~~adi~v~pS~~~Egf~~vllEAma~G~PvV~s~~----gg----~~eii~~ 305 (355)
T cd03819 234 ELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDH----GG----ARETVRP 305 (355)
T ss_pred HHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECC----CC----CHHHCCC
T ss_conf 999999981997628865762146899874032558877710000789999986998999089----99----4766158
Q ss_pred CCCEEEEEHHCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHCC
Q ss_conf 89889980001998999999999861-8999999999998527
Q gi|254781097|r 305 GGGAKVITENFLSPERLAEELCSAMK-KPSCLVQMAKQVSMKG 346 (369)
Q Consensus 305 ~G~a~~i~~~~~~~~~l~~~i~~ll~-d~~~l~~m~~~~~~~~ 346 (369)
T Consensus 306 ~~~G~l~~~~--d~~~l~~~i~~~l~~~~~~r~~~~~~ar~~~ 346 (355)
T cd03819 306 GETGLLVPPG--DAEALAQALDQILSLLPEGRAKMFAKARMCV 346 (355)
T ss_pred CCCEEEECCC--CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 9978998899--9999999999998699999999999999999