HHsearch alignment for GI: 254781097 and conserved domain: cd06218
>cd06218 DHOD_e_trans FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster.
Probab=93.06 E-value=0.61 Score=26.09 Aligned_cols=11 Identities=27% Similarity=0.413 Sum_probs=5.2
Q ss_pred CCCCEEEECCCC
Q ss_conf 667325304443
Q gi|254781097|r 155 LRKIIVTGNPIR 166 (369)
Q Consensus 155 ~~k~~~~G~PvR 166 (369)
T Consensus 79 Gd~v~v~G-P~G 89 (246)
T cd06218 79 GDELDVLG-PLG 89 (246)
T ss_pred CCEEEEEE-CCC
T ss_conf 79899995-357