HHsearch alignment for GI: 254781097 and conserved domain: cd06220
>cd06220 DHOD_e_trans_like2 FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase-like proteins. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster.
Probab=90.47 E-value=1.4 Score=23.54 Aligned_cols=14 Identities=21% Similarity=0.370 Sum_probs=6.5
Q ss_pred CCCCEEEECCCCHHH
Q ss_conf 667325304443245
Q gi|254781097|r 155 LRKIIVTGNPIRSSL 169 (369)
Q Consensus 155 ~~k~~~~G~PvR~~~ 169 (369)
T Consensus 71 Gd~i~v~G-P~G~~f 84 (233)
T cd06220 71 GDKLGIRG-PYGNGF 84 (233)
T ss_pred CCEEEEEE-CCCCCC
T ss_conf 99899983-357740