HHsearch alignment for GI: 254781097 and conserved domain: pfam01075
>pfam01075 Glyco_transf_9 Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core.
Probab=95.14 E-value=0.29 Score=28.31 Aligned_cols=96 Identities=15% Similarity=0.182 Sum_probs=48.9
Q ss_pred CEEEEEECCCCC-CCHH-HHHHHHHHHHHHHCCCCCEEEEEECCCCHHH-HHHHH-HHCCCCC-CCCCC--CCCCHHHHH
Q ss_conf 148986304322-2102-3334454432320246606776202551677-65322-1001111-34544--445144430
Q gi|254781097|r 186 FHLLVFGGSQGA-KVFS-DIVPKSIALIPEMQRKRLVIMQQVREDDKEK-VQKQY-DELGCKA-TLACF--FKDIERYIV 258 (369)
Q Consensus 186 ~~ILv~GGS~Ga-~~ln-~~v~~~~~~l~~~~~~~~~v~~~~g~~~~~~-~~~~~-~~~~~~~-~v~~f--~~~m~~~~~ 258 (369)
T Consensus 108 ~~i~i~pga~~~~K~Wp~e~f~~L~~~l~~~---~~~vvl~gg~~~~e~~~~~~i~~~~~~~~~~l~g~~sL~el~ali~ 184 (249)
T pfam01075 108 PYIAFCPGASRPAKRWPAEHFAELAQALQER---GWQVVLFGGAEDREEEIAKRLAAGLRTPCVNLLGKTSLEQAAALLA 184 (249)
T ss_pred CEEEEECCCCCCCCCCCHHHHHHHHHHHHHC---CCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH
T ss_conf 9899973878856779999999999999966---9956997386789999999998638998686269999999999998
Q ss_pred CCCEEEECCCCHHHHHHHHHCCCEEEE
Q ss_conf 044899725420233345529604875
Q gi|254781097|r 259 EANLLICRSGALTVSEIAVIGRPAILV 285 (369)
Q Consensus 259 ~aDlvIsraG~~Ti~E~~~~g~P~IlI 285 (369)
T Consensus 185 ~a~l~I~n-DSGp~HiAaA~g~Pti~i 210 (249)
T pfam01075 185 GADLVVGN-DSGLMHLAAALDRPVIGL 210 (249)
T ss_pred HCCEEEEC-CCHHHHHHHHCCCCEEEE
T ss_conf 50668857-985999999839988999