HHsearch alignment for GI: 254781097 and conserved domain: pfam07429
>pfam07429 Fuc4NAc_transf 4-alpha-L-fucosyltransferase (Fuc4NAc transferase). This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (EC 2.4.1.-) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc.
Probab=90.64 E-value=1.4 Score=23.64 Aligned_cols=139 Identities=17% Similarity=0.137 Sum_probs=80.0
Q ss_pred HCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE--EECCCCH---HHHHHHHHHC-C-CCCCCCC-C--
Q ss_conf 11447814898630432221023334454432320246606776--2025516---7765322100-1-1113454-4--
Q gi|254781097|r 180 SDLDQPFHLLVFGGSQGAKVFSDIVPKSIALIPEMQRKRLVIMQ--QVREDDK---EKVQKQYDEL-G-CKATLAC-F-- 249 (369)
Q Consensus 180 ~~~~~~~~ILv~GGS~Ga~~ln~~v~~~~~~l~~~~~~~~~v~~--~~g~~~~---~~~~~~~~~~-~-~~~~v~~-f-- 249 (369)
T Consensus 180 ~~~~~~ltIlv-GNS-g-D~sN~-HieaL~~i~~~fg~~vkiivPmgYPannq~Yi~~V~~~g~~lF~~~~~~iL~e~m~ 255 (361)
T pfam07429 180 KPRAGKLTILV-GNS-G-DRSNR-HIAALKAIHQQFGDNVRIIVPMGYPANNQAYIEQVRQAGLALFPAENLQILTEKLA 255 (361)
T ss_pred CCCCCCEEEEE-ECC-C-CCCHH-HHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCC
T ss_conf 77889538997-378-8-84404-99999999997379848999788678769999999999997648421116653189
Q ss_pred CCCCHHHHHCCCEEEE----CCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHH
Q ss_conf 4451444300448997----254202333455296048753355248989998999998898899800019989999999
Q gi|254781097|r 250 FKDIERYIVEANLLIC----RSGALTVSEIAVIGRPAILVPYPHSVDQDQLHNAYYLQEGGGAKVITENFLSPERLAEEL 325 (369)
Q Consensus 250 ~~~m~~~~~~aDlvIs----raG~~Ti~E~~~~g~P~IlIP~p~a~~~hQ~~NA~~l~~~G~a~~i~~~~~~~~~l~~~i 325 (369)
T Consensus 256 Fd~YL~lL~~cDlgyF~f~RQQgiGtlclLiq~GiP~vls-----r~Np---FwqDl~eq~vPvlf~~d~L~~~~v~eaq 327 (361)
T pfam07429 256 FDDYLALLRQCDLGYFIFNRQQGIGTLCLLIQAGVPCVLS-----RENP---FWQDMQEQQVPVLFTGDDLDEALIREAQ 327 (361)
T ss_pred HHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCEEEE-----CCCC---HHHHHHHCCCCEEECCCCCCHHHHHHHH
T ss_conf 9999999974887788530023460999998479938993-----7995---5664887289777546645679999999
Q ss_pred HHHHC
Q ss_conf 99861
Q gi|254781097|r 326 CSAMK 330 (369)
Q Consensus 326 ~~ll~ 330 (369)
T Consensus 328 rQl~~ 332 (361)
T pfam07429 328 RQLAS 332 (361)
T ss_pred HHHHH
T ss_conf 99973