HHsearch alignment for GI: 254781098 and conserved domain: TIGR03097
>TIGR03097 PEP_O_lig_1 probable O-glycosylation ligase, exosortase system type 1-associated. These proteins are members of the O-antigen polymerase (wzy) family described by pfam04932. This group is associated with genomes and ususally genomic contexts containing elements of the exosortase/PEP-CTERM protein export system, specificially the type 1 variety of this system described by the Genome Property, GenProp0652.
Probab=96.41 E-value=0.068 Score=30.37 Aligned_cols=180 Identities=10% Similarity=0.035 Sum_probs=77.7
Q ss_pred EEEECHHHHHHHH-HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 2334669988765-555678887630364332442321002355556775310112101101222122333322222222
Q gi|254781098|r 116 GTSVQPSEFMKPS-FIIVSAWFFAEQIRHPEIPGNIFSFILFGIVIALLIAQPDFGQSILVSLIWDCMFFITGISWLWIV 194 (385)
Q Consensus 116 ~~siQPSE~~Ki~-~il~lA~~l~~~~~~~~~~~~i~~~~i~~~~~~Li~~qPDlGtalii~~i~~~ml~isg~~~~~l~ 194 (385)
T Consensus 162 s~i~dnN~lalali~~lPL~~~l~~~~~-~~w~r~~~~~~~-~~~~~aii~T~SRGgllgl~~~~~~~~~~~--~~k~~~ 237 (402)
T TIGR03097 162 SFIADNNHLALALIMTLPLLRYLHLQLA-RPWQRHLLAVTM-LLTVISVLGSYSRGALLALVAMGAVLFWRS--RRKGLM 237 (402)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHH-HHHHHHHHHCCCCHHHHHHHHHHHHHHHHH--CCCHHH
T ss_conf 7467853999999999899999998565-329999999999-999999998166075999999999999982--153268
Q ss_pred CCCHHHHHCCCCHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHH-------HC-CCCCCCCCCCCCCCCC---CCCCCC--
Q ss_conf 1000011001000133331001210000447864101222222-------20-5740002254555655---553210--
Q gi|254781098|r 195 VFAFLGLMSLFIAYQTMPHVAIRINHFMTGVGDSFQIDSSRDA-------II-HGGWFGKGPGEGVIKR---VIPDSH-- 261 (385)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~y~~~Ri~~~ldp~~~gyQ~~qs~~A-------i~-sGG~~G~G~g~~~~~~---~lPe~~-- 261 (385)
T Consensus 238 ~~~~~~~~~~-~~~~~p~~~~~Rm~ti~~~~~D--~SA~gRi~aW~~a~~ma~~~Pl~G~G~~~~~~~~~~~~~~~~~~~ 314 (402)
T TIGR03097 238 SLLGAVVLLL-GLAMMPEEWWDRMNTIQTYEED--ASAMGRINAWLLAWNLAKDRPLVGGGFEYQDEFRFSTYAPVPTNV 314 (402)
T ss_pred HHHHHHHHHH-HHHHCCHHHHHHHHHHHCCCCC--CCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEECCCCCCC
T ss_conf 9999999999-9997788899998877355766--028889999999999998699724344213666478824668877
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf --00018888986346656799999999999999999835783
Q gi|254781098|r 262 --TDFVFSVAAEEFGIIFCIFILCIFAFIVVRSFLYSLVESND 302 (385)
Q Consensus 262 --tDfIfa~i~ee~G~ig~~~ii~l~~~li~r~~~~a~~~~~~ 302 (385)
T Consensus 315 ~a~HS~yFq~LgE~G~~Gl~lf~~l~~~~~~~~~~l~r~~~~~ 357 (402)
T TIGR03097 315 HAAHSIYFQVLGEHGFVGLALFLGLLALTLLRAGWLKRHARGI 357 (402)
T ss_pred CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 3138799999872187999999999999999999999973479