RPSBLAST alignment for GI: 254781098 and conserved domain: TIGR02210
>gnl|CDD|162763 TIGR02210, rodA_shape, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. Length = 352
Score = 195 bits (499), Expect = 1e-50
Identities = 102/361 (28%), Positives = 183/361 (50%), Gaps = 22/361 (6%)
Query: 18 DWFSLIAFLFLLGLGLMLSFASSPSVAEKLGLENFYFVKRHALFLIPSVIIMISFSLFSP 77
DW L+ L L+G+GL++ +++S F + ++ +++MI +L
Sbjct: 1 DWGLLLLVLLLVGIGLLVLYSASGGSFA-------PFALKQLVWFGIGLVLMIIVALIDY 53
Query: 78 KNVKNTAFILLFLSLIAMFLTLFWGVEIKGAKRWLYIAGTSVQPSEFMKPSFIIVSAWFF 137
+ ++ A+ L L L+ + L +G KGA+RW+ + +QPSEF K + I++ A +
Sbjct: 54 RFLRRLAYPLYVLGLLLLVAVLLFGTTGKGAQRWIDLGFFRLQPSEFAKLALILMLAKYL 113
Query: 138 AEQIRHPEIPGN----IFSFILFGIVIALLIAQPDFGQSILVSLIWDCMFFITGISWLWI 193
+ R + P + + IL + L++ QPD G +++++ I + F+ G+SW I
Sbjct: 114 SR--RPLDEPPRLKDLLKALILILVPALLILKQPDLGTALVIAAIGLFVLFLAGLSWKLI 171
Query: 194 VVFAFLGLMSLFIAYQTM---PHVAIRINHFMT----GVGDSFQIDSSRDAIIHGGWFGK 246
+ G ++ + R+ F+ +G + I S+ AI GG FGK
Sbjct: 172 LALLAAGAAAIPSIIWWFLLHDYQKQRVLTFLDPESDPLGAGYHIIQSKIAIGSGGLFGK 231
Query: 247 GPGEG--VIKRVIPDSHTDFVFSVAAEEFGIIFCIFILCIFAFIVVRSFLYSLVESNDFI 304
G +G +P+ HTDF+FSV AEEFG + + +L ++ +++R + + F
Sbjct: 232 GWLQGTQSQLEFLPEQHTDFIFSVLAEEFGFVGGLVLLLLYLLLILRGLRIASNAKDRFG 291
Query: 305 RMAIFGLALQIALQAFINIGVNLHLLPTKGMTMPAISYGGSSILGICITMGYLLALTCRR 364
R+ G+AL F+NIG+ + LLP G+ +P +SYGGSS+L + I G L+++ R
Sbjct: 292 RLLAGGIALTFFFYVFVNIGMVIGLLPVVGIPLPLVSYGGSSLLTLMIGFGLLMSIHTHR 351
Query: 365 P 365
Sbjct: 352 R 352