HHsearch alignment for GI: 254781099 and conserved domain: PRK05134
>PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional.
Probab=92.62 E-value=0.8 Score=24.79 Aligned_cols=113 Identities=13% Similarity=0.096 Sum_probs=62.2
Q ss_pred CHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH----HCCC--EEE--CCCC---CCCCCCCEEEEC
Q ss_conf 1321898799983685489999999985986999818964788999----7898--996--4531---572258889988
Q gi|254781099|r 3 LSSFRNHSIAVFGLGRSGLSAACALKDSGVHVIAWDDHPCAVKQAK----DMGI--EVI--DFRE---IPWSIISFLVLS 71 (468)
Q Consensus 3 ~~~~~~k~v~i~G~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~l~----~~g~--~~~--~~~~---~~~~~~d~vv~S 71 (468)
T Consensus 44 ~~~l~G~~ILDVGCGg-G-~lse~LAr~Ga~VtGID~S~~~I~~Ar~ha~~~~l~i~y~~~~~e~l~~~~~~~FDvV~~~ 121 (233)
T PRK05134 44 AGGLFGKRVLDVGCGG-G-ILSESMARLGATVTGIDASEENIEVARLHALESGLKIDYRQITAEELAAEHPGQFDVVTCM 121 (233)
T ss_pred CCCCCCCEEEEECCCC-C-HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCEEEEEEE
T ss_conf 1466899899975589-7-1128999679979998799899999999856443451167514766543057863477442
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 886856755788899999769809983034223343015688689960345752157899999987
Q gi|254781099|r 72 PGIALTGENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGTNGKSSTVALISHVLRK 137 (468)
Q Consensus 72 pgi~~~~~~~~~~~~~a~~~gi~v~s~~el~~~~~~~~~~~~~vI~VTGT~GKTTt~~ll~~iL~~ 137 (468)
T Consensus 122 E-VlEHV------------------~d~~~~l~~~~rlLKPGG~l-~lsTiNrt~~S~l~~i~~AE 167 (233)
T PRK05134 122 E-MLEHV------------------PDPASFIRACAKLVKPGGLV-FFSTLNRNLKSYLLAIVGAE 167 (233)
T ss_pred H-HHHHC------------------CCHHHHHHHHHHHHCCCCEE-EEECCCCCHHHHHHHHHHHH
T ss_conf 1-47753------------------89999999999973899149-99726789899999999998