HHsearch alignment for GI: 254781099 and conserved domain: PRK05134

>PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional.
Probab=92.62  E-value=0.8  Score=24.79  Aligned_cols=113  Identities=13%  Similarity=0.096  Sum_probs=62.2

Q ss_pred             CHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHH----HCCC--EEE--CCCC---CCCCCCCEEEEC
Q ss_conf             1321898799983685489999999985986999818964788999----7898--996--4531---572258889988
Q gi|254781099|r    3 LSSFRNHSIAVFGLGRSGLSAACALKDSGVHVIAWDDHPCAVKQAK----DMGI--EVI--DFRE---IPWSIISFLVLS   71 (468)
Q Consensus         3 ~~~~~~k~v~i~G~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~l~----~~g~--~~~--~~~~---~~~~~~d~vv~S   71 (468)
T Consensus        44 ~~~l~G~~ILDVGCGg-G-~lse~LAr~Ga~VtGID~S~~~I~~Ar~ha~~~~l~i~y~~~~~e~l~~~~~~~FDvV~~~  121 (233)
T PRK05134         44 AGGLFGKRVLDVGCGG-G-ILSESMARLGATVTGIDASEENIEVARLHALESGLKIDYRQITAEELAAEHPGQFDVVTCM  121 (233)
T ss_pred             CCCCCCCEEEEECCCC-C-HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCEEEEEEE
T ss_conf             1466899899975589-7-1128999679979998799899999999856443451167514766543057863477442


Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             886856755788899999769809983034223343015688689960345752157899999987
Q gi|254781099|r   72 PGIALTGENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGTNGKSSTVALISHVLRK  137 (468)
Q Consensus        72 pgi~~~~~~~~~~~~~a~~~gi~v~s~~el~~~~~~~~~~~~~vI~VTGT~GKTTt~~ll~~iL~~  137 (468)
T Consensus       122 E-VlEHV------------------~d~~~~l~~~~rlLKPGG~l-~lsTiNrt~~S~l~~i~~AE  167 (233)
T PRK05134        122 E-MLEHV------------------PDPASFIRACAKLVKPGGLV-FFSTLNRNLKSYLLAIVGAE  167 (233)
T ss_pred             H-HHHHC------------------CCHHHHHHHHHHHHCCCCEE-EEECCCCCHHHHHHHHHHHH
T ss_conf             1-47753------------------89999999999973899149-99726789899999999998