HHsearch alignment for GI: 254781099 and conserved domain: PRK05225
>PRK05225 ketol-acid reductoisomerase; Validated.
Probab=94.07 E-value=0.23 Score=28.49 Aligned_cols=78 Identities=21% Similarity=0.296 Sum_probs=53.4
Q ss_pred HHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC------HHHHHHHHCCCEEECCCCCCCCCCCEEEECCCCCCCC
Q ss_conf 2189879998368548999999998598699981896------4788999789899645315722588899888868567
Q gi|254781099|r 5 SFRNHSIAVFGLGRSGLSAACALKDSGVHVIAWDDHP------CAVKQAKDMGIEVIDFREIPWSIISFLVLSPGIALTG 78 (468)
Q Consensus 5 ~~~~k~v~i~G~G~sG~s~A~~l~~~G~~V~~~D~~~------~~~~~l~~~g~~~~~~~~~~~~~~d~vv~Spgi~~~~ 78 (468)
T Consensus 34 ~LKgKkI~IiG~GsQG~aqaLNlRDSGldV~~~LR~~si~~k~~Sw~~A~~~Gf~V~t~eeai-~~ADvV~~L---tPD- 108 (489)
T PRK05225 34 YLKGKKIVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELI-PQADLVVNL---TPD- 108 (489)
T ss_pred HHCCCEEEEECCCHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHH-HCCCEEEEE---CCC-
T ss_conf 752885999803658777652441058856999555303341667999997799646789973-235878870---885-
Q ss_pred CCCCHHHHHH
Q ss_conf 5578889999
Q gi|254781099|r 79 ENAHWCVKLA 88 (468)
Q Consensus 79 ~~~~~~~~~a 88 (468)
T Consensus 109 -~q~~~v~~~ 117 (489)
T PRK05225 109 -KQHSDVVRA 117 (489)
T ss_pred -CCHHHHHHH
T ss_conf -514899999