HHsearch alignment for GI: 254781099 and conserved domain: PRK05562

Probab=95.87  E-value=0.16  Score=29.69  Aligned_cols=125  Identities=14%  Similarity=0.190  Sum_probs=76.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECC-CHHHHHHHHCC-CEEE--CCCCCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf             8987999836854899999999859869998189-64788999789-8996--453157225888998888685675578
Q gi|254781099|r    7 RNHSIAVFGLGRSGLSAACALKDSGVHVIAWDDH-PCAVKQAKDMG-IEVI--DFREIPWSIISFLVLSPGIALTGENAH   82 (468)
Q Consensus         7 ~~k~v~i~G~G~sG~s~A~~l~~~G~~V~~~D~~-~~~~~~l~~~g-~~~~--~~~~~~~~~~d~vv~Spgi~~~~~~~~   82 (468)
T Consensus        23 ~klkvLVVGGG~VA~RKi~~Ll~agA~VtVVSP~~~~el~~L~~~~~I~~i~r~y~~~dL~~~~LVIaA----Tdd~~lN   98 (222)
T PRK05562         23 NKIKVLVIGGGKAAFIKGKTFLKKGCYVEILSKEFSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIIIA----TDDEELN   98 (222)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCEEEEECCCCHHHCCCCCEEEEE----CCCHHHH
T ss_conf             676699999879999999999878998999878668899999975986999686797780887399994----7988999


Q ss_pred             HHH-HHHHHCCCEEE--EEHHHHHHHHHHCCCCCC-EEEEECCCCCCHH-HHHHHHHHH
Q ss_conf             889-99997698099--830342233430156886-8996034575215-789999998
Q gi|254781099|r   83 WCV-KLANQFNVEII--GDIELFVRERRFSSLQSP-FIAVTGTNGKSST-VALISHVLR  136 (468)
Q Consensus        83 ~~~-~~a~~~gi~v~--s~~el~~~~~~~~~~~~~-vI~VTGT~GKTTt-~~ll~~iL~  136 (468)
T Consensus        99 ~~I~~~a~~~~ilvNvvddp~~~~fi~Paiv~Rg~L~IAIS-T~G~SP~lAr~iR~klE  156 (222)
T PRK05562         99 NKIRKHCDRLYKLYIDCSDFKKGLCVIPYQRSSKNMVFALN-TKGGSPKTSVFIGEKVK  156 (222)
T ss_pred             HHHHHHHHHHCCEEEECCCCCCCCEEECEEEEECCEEEEEE-CCCCCHHHHHHHHHHHH
T ss_conf             99999999809988985788768179770997289799998-99989799999999999