HHsearch alignment for GI: 254781099 and conserved domain: PRK09496

Probab=96.33  E-value=0.021  Score=35.77  Aligned_cols=81  Identities=16%  Similarity=0.232  Sum_probs=57.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH-CCCEEECC--------CCCCCCCCCEEEECCCCCCCCCC
Q ss_conf             7999836854899999999859869998189647889997-89899645--------31572258889988886856755
Q gi|254781099|r   10 SIAVFGLGRSGLSAACALKDSGVHVIAWDDHPCAVKQAKD-MGIEVIDF--------REIPWSIISFLVLSPGIALTGEN   80 (468)
Q Consensus        10 ~v~i~G~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~l~~-~g~~~~~~--------~~~~~~~~d~vv~Spgi~~~~~~   80 (468)
T Consensus         2 ~IiI~GaG~vG~~La~~Ls~e~~dV~vID~d~~~~~~~~~~lDv~~i~Gd~~~~~~L~~Agi~~ad~~IAv----T~~De   77 (455)
T PRK09496          2 KIIILGAGQVGGTLAERLVGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSHPDVLREAGAEDADMLIAV----TDSDE   77 (455)
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCEEEEEECCCCHHHHHHCCCCCCCEEEEE----CCCHH
T ss_conf             79999988899999999986899799998999999998862586899966899999996599869999995----79718


Q ss_pred             CCHHH-HHHHHC-CCE
Q ss_conf             78889-999976-980
Q gi|254781099|r   81 AHWCV-KLANQF-NVE   94 (468)
Q Consensus        81 ~~~~~-~~a~~~-gi~   94 (468)
T Consensus        78 ~Nli~~~lAk~l~g~~   93 (455)
T PRK09496         78 TNMVACQIAKSLFGTP   93 (455)
T ss_pred             HHHHHHHHHHHHCCCC
T ss_conf             9999999999866998