HHsearch alignment for GI: 254781099 and conserved domain: PRK10773
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed.
Probab=100.00 E-value=0 Score=391.70 Aligned_cols=323 Identities=17% Similarity=0.217 Sum_probs=242.8
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC----CCCCCCCCCCCCCCCEEEEECCCC-CCC---CCCCCCC
Q ss_conf 56886899603457521578999999873100000001----244322110168883799921775-432---1223332
Q gi|254781099|r 110 SLQSPFIAVTGTNGKSSTVALISHVLRKNGYDVQLGGN----IGLPILNLEYFSPNRFYVIECSSY-QIE---LTPTIDP 181 (468)
Q Consensus 110 ~~~~~vI~VTGT~GKTTt~~ll~~iL~~~g~~~~~~GN----iG~p~~~~~~~~~~~~~V~E~SSf-QL~---~~~~~~P 181 (468)
T Consensus 97 ~~~~~vIgITGSnGKTTtk~~i~~iL~~~g~~~~t~gn~n~~iG~p~tl~~~~~~~~~~v~E~g~~~~gei~~~~~~~~p 176 (452)
T PRK10773 97 QVPARVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPLTLLRLTPEYDYAVIELGANHQGEIAWTVSLTRP 176 (452)
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHCCCCC
T ss_conf 59975899991699625999999999972884124565268878660765079213357853237985356766400266
Q ss_pred CCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEC---CCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCC----CC-CCCC
Q ss_conf 210111002101222111000011221000101---344322478678999874012343011036443----22-2341
Q gi|254781099|r 182 SIGVLLNISPDHLDRHHTLENYVNIKKKIVTMS---KHAIICINDHQCEKIAYDMNFIGHSISRISSQS----LQ-SDSD 253 (468)
Q Consensus 182 diavITNI~~DHLd~~~s~e~y~~aK~~i~~~~---~~~iln~dd~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~ 253 (468)
T Consensus 177 diaviTNI~~dHLd~~gs~e~~~~aK~~Lf~~l~~~g~~IlN~Dd~~~~~~~~~~~~~~--v~~~~~~~~~~d~~~~~i~ 254 (452)
T PRK10773 177 EAALVNNLAAAHLEGFGSLAGVAKAKGEIFTGLPENGIAIMNADNNDWLNWQSVIGSRK--VWRFSPNAANSDFTATNIH 254 (452)
T ss_pred CEEEEEECCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCE--EEEECCCCCCCCEEEEEEE
T ss_conf 75999842477654057699999999999817887989999798767999999837982--8998068777618999999
Q ss_pred EEECCCEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCEEECCCCC
Q ss_conf 12124135414676421234558851011100110122210222221100000000134544332100343000002355
Q gi|254781099|r 254 LYIDESFLKCSATSEVIFDFSQETKKHNIQNLVTSAVVCMQLGLKVEEIKRALLSCGGLTHRLQTIARLGHVIFINDSKA 333 (468)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~l~G~HNi~NalaAia~a~~lGi~~~~i~~~L~~f~gv~~R~E~i~~~~gv~iIDDS~a 333 (468)
T Consensus 255 ~~~~g~~f~l~~~~~~~~v~l~l~G~hnv~NalaAiava~~lG~~~~~i~~~L~~~~~v~GRme~i~~~~g~~iIdDsYN 334 (452)
T PRK10773 255 VTSHGTEFTLHTPTGSVDVLLPLPGRHNIANALAAAALAMSVGATLDAVKAGLANLKAVPGRLFPIQLAENQLLLDDSYN 334 (452)
T ss_pred EECCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCC
T ss_conf 91894189999679518999707617689989999999998599999999999728998674079973870899974256
Q ss_pred CCHHHHHHHHHC---CCCCCEEEECCCCCCCC-----HHHHHHHHC--CCCEEEEECCCHHHHHHHHHCCCCEEEECCHH
Q ss_conf 675555553201---33320012032101220-----689899842--78689998899899888631689889987999
Q gi|254781099|r 334 TNLHSVIHAFLN---EKRRIYWIAGGLSKSDD-----FSTLFPFIS--KIAKAYFIGNSAMLFFHHFGGKINSTLSKTLD 403 (468)
Q Consensus 334 tnp~a~~~Al~~---~~~~i~lI~GG~~K~~d-----~~~L~~~~~--~~~~~~liG~~~~~i~~~~~~~~~~~~~~~~~ 403 (468)
T Consensus 335 AnP~Sm~aal~~l~~~~~~ki~VLGdM~ELG~~s~~~H~~v~~~~~~~~id~v~~vG~~~~~~~~~~~---~~~~f~~~~ 411 (452)
T PRK10773 335 ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHRQVGEAAKAAGIDRVLSVGKLSQAISTASG---VGEHFADKT 411 (452)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCC---CCCCCCCHH
T ss_conf 99799999999997577976999877377285789999999999997699999998878999987418---763369999
Q ss_pred HHHHHHHHHHHHCCCCC--EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 99999999998448985--99945221663134798999999999998637
Q gi|254781099|r 404 QALKSVVRDVENVQLPS--IVLFSPGCASFDQYNNFRERGFSFMSQVSEIP 452 (468)
Q Consensus 404 ~a~~~i~~~~~~~~~gD--iVLlSPa~aS~d~f~~y~~RG~~F~~~v~~l~ 452 (468)
T Consensus 412 ~~~~~l~~---~l~~~~~~~vLvK---GS---------r~~~le~iv~~L~ 447 (452)
T PRK10773 412 ALIARLKA---LLAEQQVITILVK---GS---------RSAAMEEVVRALQ 447 (452)
T ss_pred HHHHHHHH---HHHCCCCEEEEEE---CC---------CCCCHHHHHHHHH
T ss_conf 99999998---8744998489998---57---------5114999999999