HHsearch alignment for GI: 254781099 and conserved domain: PRK10773

>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed.
Probab=100.00  E-value=0  Score=391.70  Aligned_cols=323  Identities=17%  Similarity=0.217  Sum_probs=242.8

Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC----CCCCCCCCCCCCCCCEEEEECCCC-CCC---CCCCCCC
Q ss_conf             56886899603457521578999999873100000001----244322110168883799921775-432---1223332
Q gi|254781099|r  110 SLQSPFIAVTGTNGKSSTVALISHVLRKNGYDVQLGGN----IGLPILNLEYFSPNRFYVIECSSY-QIE---LTPTIDP  181 (468)
Q Consensus       110 ~~~~~vI~VTGT~GKTTt~~ll~~iL~~~g~~~~~~GN----iG~p~~~~~~~~~~~~~V~E~SSf-QL~---~~~~~~P  181 (468)
T Consensus        97 ~~~~~vIgITGSnGKTTtk~~i~~iL~~~g~~~~t~gn~n~~iG~p~tl~~~~~~~~~~v~E~g~~~~gei~~~~~~~~p  176 (452)
T PRK10773         97 QVPARVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPLTLLRLTPEYDYAVIELGANHQGEIAWTVSLTRP  176 (452)
T ss_pred             CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHCCCCC
T ss_conf             59975899991699625999999999972884124565268878660765079213357853237985356766400266


Q ss_pred             CCCEEEEECCCHHHHHHHHHHCCCCCCCEEEEC---CCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCC----CC-CCCC
Q ss_conf             210111002101222111000011221000101---344322478678999874012343011036443----22-2341
Q gi|254781099|r  182 SIGVLLNISPDHLDRHHTLENYVNIKKKIVTMS---KHAIICINDHQCEKIAYDMNFIGHSISRISSQS----LQ-SDSD  253 (468)
Q Consensus       182 diavITNI~~DHLd~~~s~e~y~~aK~~i~~~~---~~~iln~dd~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~  253 (468)
T Consensus       177 diaviTNI~~dHLd~~gs~e~~~~aK~~Lf~~l~~~g~~IlN~Dd~~~~~~~~~~~~~~--v~~~~~~~~~~d~~~~~i~  254 (452)
T PRK10773        177 EAALVNNLAAAHLEGFGSLAGVAKAKGEIFTGLPENGIAIMNADNNDWLNWQSVIGSRK--VWRFSPNAANSDFTATNIH  254 (452)
T ss_pred             CEEEEEECCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCE--EEEECCCCCCCCEEEEEEE
T ss_conf             75999842477654057699999999999817887989999798767999999837982--8998068777618999999


Q ss_pred             EEECCCEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCCEEECCCCC
Q ss_conf             12124135414676421234558851011100110122210222221100000000134544332100343000002355
Q gi|254781099|r  254 LYIDESFLKCSATSEVIFDFSQETKKHNIQNLVTSAVVCMQLGLKVEEIKRALLSCGGLTHRLQTIARLGHVIFINDSKA  333 (468)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~l~G~HNi~NalaAia~a~~lGi~~~~i~~~L~~f~gv~~R~E~i~~~~gv~iIDDS~a  333 (468)
T Consensus       255 ~~~~g~~f~l~~~~~~~~v~l~l~G~hnv~NalaAiava~~lG~~~~~i~~~L~~~~~v~GRme~i~~~~g~~iIdDsYN  334 (452)
T PRK10773        255 VTSHGTEFTLHTPTGSVDVLLPLPGRHNIANALAAAALAMSVGATLDAVKAGLANLKAVPGRLFPIQLAENQLLLDDSYN  334 (452)
T ss_pred             EECCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCEEEEEEECCC
T ss_conf             91894189999679518999707617689989999999998599999999999728998674079973870899974256


Q ss_pred             CCHHHHHHHHHC---CCCCCEEEECCCCCCCC-----HHHHHHHHC--CCCEEEEECCCHHHHHHHHHCCCCEEEECCHH
Q ss_conf             675555553201---33320012032101220-----689899842--78689998899899888631689889987999
Q gi|254781099|r  334 TNLHSVIHAFLN---EKRRIYWIAGGLSKSDD-----FSTLFPFIS--KIAKAYFIGNSAMLFFHHFGGKINSTLSKTLD  403 (468)
Q Consensus       334 tnp~a~~~Al~~---~~~~i~lI~GG~~K~~d-----~~~L~~~~~--~~~~~~liG~~~~~i~~~~~~~~~~~~~~~~~  403 (468)
T Consensus       335 AnP~Sm~aal~~l~~~~~~ki~VLGdM~ELG~~s~~~H~~v~~~~~~~~id~v~~vG~~~~~~~~~~~---~~~~f~~~~  411 (452)
T PRK10773        335 ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHRQVGEAAKAAGIDRVLSVGKLSQAISTASG---VGEHFADKT  411 (452)
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHCC---CCCCCCCHH
T ss_conf             99799999999997577976999877377285789999999999997699999998878999987418---763369999


Q ss_pred             HHHHHHHHHHHHCCCCC--EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             99999999998448985--99945221663134798999999999998637
Q gi|254781099|r  404 QALKSVVRDVENVQLPS--IVLFSPGCASFDQYNNFRERGFSFMSQVSEIP  452 (468)
Q Consensus       404 ~a~~~i~~~~~~~~~gD--iVLlSPa~aS~d~f~~y~~RG~~F~~~v~~l~  452 (468)
T Consensus       412 ~~~~~l~~---~l~~~~~~~vLvK---GS---------r~~~le~iv~~L~  447 (452)
T PRK10773        412 ALIARLKA---LLAEQQVITILVK---GS---------RSAAMEEVVRALQ  447 (452)
T ss_pred             HHHHHHHH---HHHCCCCEEEEEE---CC---------CCCCHHHHHHHHH
T ss_conf             99999998---8744998489998---57---------5114999999999