HHsearch alignment for GI: 254781099 and conserved domain: PRK11790

Probab=96.58  E-value=0.0093  Score=38.14  Aligned_cols=82  Identities=12%  Similarity=0.087  Sum_probs=41.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHCCCE-EEEEECC--CHHH-HHHHHCCCEEE-CCCCC---CCC-CCCE-EEECCCCCCCCC
Q ss_conf             799983685489999999985986-9998189--6478-89997898996-45315---722-5888-998888685675
Q gi|254781099|r   10 SIAVFGLGRSGLSAACALKDSGVH-VIAWDDH--PCAV-KQAKDMGIEVI-DFREI---PWS-IISF-LVLSPGIALTGE   79 (468)
Q Consensus        10 ~v~i~G~G~sG~s~A~~l~~~G~~-V~~~D~~--~~~~-~~l~~~g~~~~-~~~~~---~~~-~~d~-vv~Spgi~~~~~   79 (468)
T Consensus        12 kiL~~d-~i-~~~~~~~L~~~G~~~v~~~~~~l~~eeL~~~i~~~d~liiRS~t~vt~~vi~~a~~Lk~I~r~GvG~dnI   89 (409)
T PRK11790         12 KFLLLE-GI-HQSAVEVLRAAGYTNIEYHKGALDEEELKEAIKDAHFIGIRSRTQLTEEVLEAAEKLVAIGCFCIGTNQV   89 (409)
T ss_pred             EEEEEC-CC-CHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCEEEEECCCCCCCC
T ss_conf             799807-88-9899999997799778826899999999998567989999179873999994399971999832157740


Q ss_pred             CCCHHHHHHHHCCCEEEE
Q ss_conf             578889999976980998
Q gi|254781099|r   80 NAHWCVKLANQFNVEIIG   97 (468)
Q Consensus        80 ~~~~~~~~a~~~gi~v~s   97 (468)
T Consensus        90 D----l~aa~~~GI~V~N  103 (409)
T PRK11790         90 D----LDAAAKRGIPVFN  103 (409)
T ss_pred             C----HHHHHHCCCEEEE
T ss_conf             8----9999869948996