HHsearch alignment for GI: 254781099 and conserved domain: PRK12814
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional.
Probab=98.09 E-value=3.1e-05 Score=55.27 Aligned_cols=69 Identities=26% Similarity=0.387 Sum_probs=52.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC---------------------HHHHHHHHCCCEEECC----CCCC
Q ss_conf 89879998368548999999998598699981896---------------------4788999789899645----3157
Q gi|254781099|r 7 RNHSIAVFGLGRSGLSAACALKDSGVHVIAWDDHP---------------------CAVKQAKDMGIEVIDF----REIP 61 (468)
Q Consensus 7 ~~k~v~i~G~G~sG~s~A~~l~~~G~~V~~~D~~~---------------------~~~~~l~~~g~~~~~~----~~~~ 61 (468)
T Consensus 192 tGKkVAIIGaGPAGLsaAy~L~~~Gh~VTVfE~~~~~GGmlryGIP~yRLPk~vld~EI~~i~~~GV~~~~n~~vG~dit 271 (652)
T PRK12814 192 SGKKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGRDIT 271 (652)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCC
T ss_conf 89979996837899999999997799069981588889867644863338999999999999971985886679477477
Q ss_pred ----CCCCCEEEECCCCC
Q ss_conf ----22588899888868
Q gi|254781099|r 62 ----WSIISFLVLSPGIA 75 (468)
Q Consensus 62 ----~~~~d~vv~Spgi~ 75 (468)
T Consensus 272 l~~L~~~yDAVflaiGa~ 289 (652)
T PRK12814 272 LEELQKEFDAVLLAVGAQ 289 (652)
T ss_pred HHHHHHHCCEEEEEECCC
T ss_conf 999986589999975578