HHsearch alignment for GI: 254781099 and conserved domain: PRK13869

>PRK13869 plasmid-partitioning protein RepA; Provisional.
Probab=93.92  E-value=0.045  Score=33.39  Aligned_cols=34  Identities=38%  Similarity=0.490  Sum_probs=30.6

Q ss_pred             CCCEEEEE---CCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             88689960---34575215789999998731000000
Q gi|254781099|r  112 QSPFIAVT---GTNGKSSTVALISHVLRKNGYDVQLG  145 (468)
Q Consensus       112 ~~~vI~VT---GT~GKTTt~~ll~~iL~~~g~~~~~~  145 (468)
T Consensus       120 ~~kVIaVaN~KGGVGKTTtav~LA~~LA~~G~RVLlI  156 (405)
T PRK13869        120 HLQVIAVTNFKGGSGKTTTSAHLAQYLALQGYRVLAV  156 (405)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             9828999788877659999999999999779988999