HHsearch alignment for GI: 254781099 and conserved domain: TIGR01499

>TIGR01499 folC FolC bifunctional protein; InterPro: IPR001645 Folylpolyglutamate synthase 6.3.2.17 from EC (FPGS) is responsible for the addition of a polyglutamate tail to folate and folate derivatives, is an ATP-dependent enzyme isolated from eukaryotic and bacterial sources, where it plays a key role in the retention of the intracellular folate pool Its sequence is moderately conserved between prokaryotes (gene folC) and eukaryotes. FPGS belongs to a protein family that contains a number of related peptidoglycan synthetases (Mur) 6.3.2. from EC (see ). A crystal structure of the MgATP complex of the enzyme from Lactobacillus casei reveals that folylpolyglutamate synthetase is a modular protein consisting of two domains, one with a typical mononucleotide-binding fold and the other strikingly similar to the folate-binding enzyme dihydrofolate reductase. The active site of the enzyme is located in a large interdomain cleft adjacent to an ATP-binding P-loop motif. Opposite this site, in the C domain, a cavity likely to be the folate binding site has been identified, and inspection of this cavity and the surrounding protein structure suggests that the glutamate tail of the substrate may project into the active site. A further feature of the structure is a well defined Omega loop, which contributes both to the active site and to interdomain interactions .; GO: 0004326 tetrahydrofolylpolyglutamate synthase activity, 0005524 ATP binding, 0009396 folic acid and derivative biosynthetic process.
Probab=99.91  E-value=2.9e-24  Score=186.59  Aligned_cols=258  Identities=22%  Similarity=0.240  Sum_probs=178.3

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHH-HHHHHHCCCCC-------C--C---CCCCCC-------------------------
Q ss_conf             86899603457521578999999-87310000000-------1--2---443221-------------------------
Q gi|254781099|r  113 SPFIAVTGTNGKSSTVALISHVL-RKNGYDVQLGG-------N--I---GLPILN-------------------------  154 (468)
Q Consensus       113 ~~vI~VTGT~GKTTt~~ll~~iL-~~~g~~~~~~G-------N--i---G~p~~~-------------------------  154 (468)
T Consensus        21 ~~~IHVaGTNGKGST~a~l~~iL~~~~G~~VG~fTSPHl~~f~ERI~~nG~~i~d~~~~~~~~~~~~~~~~~~~~~~~~~  100 (460)
T TIGR01499        21 LPVIHVAGTNGKGSTCAFLESILREAAGYKVGLFTSPHLVSFNERIRVNGEPISDEELAQAFEQVRPILKKLSQETEYSQ  100 (460)
T ss_pred             CCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEEEECCEECCHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             97799972068758999999998875397788887373874223478988576889999999999998753310135877


Q ss_pred             -------------CCCC-CCCCEEEEECC-CCCCCCCCCCC-CCCCEEEEECCCHHHHHH-HHHHCCCCCCCEEEECCCC
Q ss_conf             -------------1016-88837999217-75432122333-221011100210122211-1000011221000101344
Q gi|254781099|r  155 -------------LEYF-SPNRFYVIECS-SYQIELTPTID-PSIGVLLNISPDHLDRHH-TLENYVNIKKKIVTMSKHA  217 (468)
Q Consensus       155 -------------~~~~-~~~~~~V~E~S-SfQL~~~~~~~-PdiavITNI~~DHLd~~~-s~e~y~~aK~~i~~~~~~~  217 (468)
T Consensus       101 ~t~FE~~T~~Af~~F~~~~~vd~av~EVGlGGrlDaTNv~~~p~~~~iT~ig~DH~~~LG~t~~~IA~eKAGI~k~g~P~  180 (460)
T TIGR01499       101 PTFFELLTLLAFLYFAQLAQVDVAVLEVGLGGRLDATNVVEKPLVSVITSIGLDHTEILGDTLEEIAWEKAGIIKEGVPI  180 (460)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCE
T ss_conf             77899999999999998508828999873765445544113863799727776888650533799999745762167656


Q ss_pred             CCCC-CCHHHHHHHHHCC-CCC-CEEECCCCCCCCCCCCEEECCCEEEECCCCCCCCC---CCCCCCCHHHHHCCCHHHH
Q ss_conf             3224-7867899987401-234-30110364432223411212413541467642123---4558851011100110122
Q gi|254781099|r  218 IICI-NDHQCEKIAYDMN-FIG-HSISRISSQSLQSDSDLYIDESFLKCSATSEVIFD---FSQETKKHNIQNLVTSAVV  291 (468)
Q Consensus       218 iln~-dd~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~G~HNi~NalaAia~  291 (468)
T Consensus       181 v~~~~~~~ea~~v~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~L~G~~Q~~Na~~A~~~  260 (460)
T TIGR01499       181 VTGEVQEPEALEVLKKKAEEKGAAPLQVVGKDFDIKEKDENLNGEKFSFSGENLFLEPLLAKLSLLGDHQAENAALALAA  260 (460)
T ss_pred             EEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             87148866899999999997168604650341322111122465212223555421001355565679999999999999


Q ss_pred             HHCCCCC------CCCCH-HHCCCHHHHHHHHHHHCCCC-----CCEEECCCCCCCHHHHHHHHHCC------CCCCEEE
Q ss_conf             2102222------21100-00000013454433210034-----30000023556755555532013------3320012
Q gi|254781099|r  292 CMQLGLK------VEEIK-RALLSCGGLTHRLQTIARLG-----HVIFINDSKATNLHSVIHAFLNE------KRRIYWI  353 (468)
Q Consensus       292 a~~lGi~------~~~i~-~~L~~f~gv~~R~E~i~~~~-----gv~iIDDS~atnp~a~~~Al~~~------~~~i~lI  353 (468)
T Consensus       261 ~~~l~~~~~~~~~~~~~~~~GL~~~~-wpGR~e~~~~~~~~~~~~p~~~lDG-AHNp~~~~~l~~~~~~~~~~~~~~~~~  338 (460)
T TIGR01499       261 LEVLGKQSSEKLSEAAIRSEGLASTI-WPGRLEILSEDKDAKAANPNILLDG-AHNPHSAEALVEWLKEKEFNGRPITLL  338 (460)
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHHHC-CCCCEEEEECCCCHHHCCCEEEEEC-CCCHHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf             99850235666676678889888511-1220113303541223387179952-768789999999999986269971888


Q ss_pred             ECCCCCCCCHHHHHHHHCCC
Q ss_conf             03210122068989984278
Q gi|254781099|r  354 AGGLSKSDDFSTLFPFISKI  373 (468)
Q Consensus       354 ~GG~~K~~d~~~L~~~~~~~  373 (468)
T Consensus       339 ~~~l-~~Kd~~~~l~~L~~~  357 (460)
T TIGR01499       339 FGAL-ADKDAAAMLALLREL  357 (460)
T ss_pred             EEEC-CCCCHHHHHHHHHHH
T ss_conf             8611-368878998887874