>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

Probab=97.24  E-value=0.0065  Score=39.22  Aligned_cols=43  Identities=16%  Similarity=0.319  Sum_probs=36.1

Q ss_pred             HHCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECCCHHHHHH
Q ss_conf             2189879998368548999999998598-699981896478899
Q gi|254781099|r    5 SFRNHSIAVFGLGRSGLSAACALKDSGV-HVIAWDDHPCAVKQA   47 (468)
Q Consensus         5 ~~~~k~v~i~G~G~sG~s~A~~l~~~G~-~V~~~D~~~~~~~~l   47 (468)
T Consensus        16 ~~~~k~vlIlGaGGaarai~~aL~~~g~~~I~i~nR~~~r~~~l   59 (155)
T cd01065          16 ELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKAL   59 (155)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
T ss_conf             85799999986758999999999971998228860899999999