HHsearch alignment for GI: 254781099 and conserved domain: cd05293
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.05 E-value=0.023 Score=35.42 Aligned_cols=73 Identities=11% Similarity=0.183 Sum_probs=47.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEECCCHHH----HHHHH----CC-CEEEC-CCCCCCCCCCEEEECCCC
Q ss_conf 89879998368548999999998598--699981896478----89997----89-89964-531572258889988886
Q gi|254781099|r 7 RNHSIAVFGLGRSGLSAACALKDSGV--HVIAWDDHPCAV----KQAKD----MG-IEVID-FREIPWSIISFLVLSPGI 74 (468)
Q Consensus 7 ~~k~v~i~G~G~sG~s~A~~l~~~G~--~V~~~D~~~~~~----~~l~~----~g-~~~~~-~~~~~~~~~d~vv~Spgi 74 (468)
T Consensus 2 ~r~Kv~IIGaG~VG~~~A~~l~~~~l~~el~L~Di~~~~a~g~a~Dl~h~~~~~~~~~v~~~~d~~~~~~aDvVVitAG~ 81 (312)
T cd05293 2 PRNKVTVVGVGQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIVTAGA 81 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHCCCCEEEECCCC
T ss_conf 98869998978889999999996699887999938898332688886604012798559937999996899999988999
Q ss_pred CCCCC
Q ss_conf 85675
Q gi|254781099|r 75 ALTGE 79 (468)
Q Consensus 75 ~~~~~ 79 (468)
T Consensus 82 ~~k~g 86 (312)
T cd05293 82 RQNEG 86 (312)
T ss_pred CCCCC
T ss_conf 99989