HHsearch alignment for GI: 254781099 and conserved domain: cd05313
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=97.09 E-value=0.026 Score=35.01 Aligned_cols=112 Identities=17% Similarity=0.163 Sum_probs=63.4
Q ss_pred HHHCCCEEEEECCCHHHHHHHHHHHHCCCEEE-EEECC-----C-----HHHHHHH---HC-C------------CEEEC
Q ss_conf 32189879998368548999999998598699-98189-----6-----4788999---78-9------------89964
Q gi|254781099|r 4 SSFRNHSIAVFGLGRSGLSAACALKDSGVHVI-AWDDH-----P-----CAVKQAK---DM-G------------IEVID 56 (468)
Q Consensus 4 ~~~~~k~v~i~G~G~sG~s~A~~l~~~G~~V~-~~D~~-----~-----~~~~~l~---~~-g------------~~~~~ 56 (468)
T Consensus 34 ~~l~g~~vaIQGfGnVG~~aA~~l~e~GakvVaVsD~~G~i~~~~Gld~~~l~~l~~~k~~~~~~~~~~~~~~~~~~~~~ 113 (254)
T cd05313 34 ETLKGKRVAISGSGNVAQYAAEKLLELGAKVVTLSDSKGYVYDPDGFTGEKLAELKEIKEVRRGRVSEYAKKYGTAKYFE 113 (254)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCEECC
T ss_conf 69589999998977999999999997799799998578508879999889999999999746871024441389856638
Q ss_pred CCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 53157225888998888685675578889999976980998303422334301568868996034575215789999998
Q gi|254781099|r 57 FREIPWSIISFLVLSPGIALTGENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIAVTGTNGKSSTVALISHVLR 136 (468)
Q Consensus 57 ~~~~~~~~~d~vv~Spgi~~~~~~~~~~~~~a~~~gi~v~s~~el~~~~~~~~~~~~~vI~VTGT~GKTTt~~ll~~iL~ 136 (468)
T Consensus 114 ~~~~~~~~cDIliPa-----A~en-~I~~~nA~--------------~i---~a~~ck~I-vEgANgP~T~eA--d~iL~ 167 (254)
T cd05313 114 GKKPWEVPCDIAFPC-----ATQN-EVDAEDAK--------------LL---VKNGCKYV-AEGANMPCTAEA--IEVFR 167 (254)
T ss_pred CCCHHHCCCCEEEEC-----CCCC-CCCHHHHH--------------HH---HHCCCEEE-EECCCCCCCHHH--HHHHH
T ss_conf 975133047699743-----5466-78999999--------------99---96798299-865889998789--99999
Q ss_pred HHHHH
Q ss_conf 73100
Q gi|254781099|r 137 KNGYD 141 (468)
Q Consensus 137 ~~g~~ 141 (468)
T Consensus 168 ~kGI~ 172 (254)
T cd05313 168 QAGVL 172 (254)
T ss_pred HCCCE
T ss_conf 88988