RPSBLAST alignment for GI: 254781099 and conserved domain: PRK00141

>gnl|CDD|178896 PRK00141, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 473
 Score =  148 bits (375), Expect = 3e-36
 Identities = 132/468 (28%), Positives = 213/468 (45%), Gaps = 46/468 (9%)

Query: 1   MKLSSFRNHSIAVFGLGRSGLSAACALKDSGVHVIAWDDHPCAV-KQAKDMGIEVIDFRE 59
             L    +  + V G G SG   A  L + G  V+  DD+  A  K  +  G+  I   E
Sbjct: 8   SALPQELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAE 67

Query: 60  IPWSIISF--LVLSPGIALTGENAHW-----CVKLANQFNVEIIGDIELFVRERRFSSLQ 112
               + SF  +V SPG         W      +  A    +E+IGD+EL  R  +     
Sbjct: 68  ASDQLDSFSLVVTSPG---------WRPDSPLLVDAQSQGLEVIGDVELAWRLDQAGVFG 118

Query: 113 SP--FIAVTGTNGKSSTVALISHVLRKNGYDVQLGGNIGLPI---LNLEYFSPNR--FYV 165
            P  ++AVTGTNGK++T A+++ ++++ G+  Q  GNIG+P+   L     +  R    V
Sbjct: 119 EPRTWLAVTGTNGKTTTTAMLAAMMQEGGFAAQAVGNIGVPVSAALV----AQPRIDVLV 174

Query: 166 IECSSYQIELTPTIDPSIGVLLNISPDHLDRHHTLENYVNIKKKIVTMSKHAIICINDHQ 225
            E SS+Q+  +PT+ P +GV+LN++ DH+D H ++ +Y   K K++     A+I  +D  
Sbjct: 175 AELSSFQLHWSPTLTPDVGVVLNLAEDHIDWHGSMRDYAADKAKVLR-GPVAVIGADDEY 233

Query: 226 CEKIAYDM---NFIGHSISRISSQSLQSDSDLYIDESFLKCS--ATSEVIFDFSQETKKH 280
             ++         IG ++   ++  +       +D +F +    A++E I          
Sbjct: 234 VVQLTSAADLSGLIGFTMGEPAAGQVGVRDGELVDNAFGQNVVLASAEGI----SPAGPA 289

Query: 281 NIQNLVTSAVVCMQLGLKVEEIKRALLSCGGLTHRLQTIARLGHVIFINDSKATNLHSVI 340
            + + + +A V    G+  E I RAL S     HR Q +A  G V +I++SKATN H+  
Sbjct: 290 GVLDALAAAAVARSQGVAPEAIARALSSFEVAGHRGQVVAEHGGVTWIDNSKATNPHAAD 349

Query: 341 HAFLNEKRRIYWIAGGLSKSDDFSTLFPFIS-KIAKAYFIGNS-----AMLFFHHFGGKI 394
            A L     + W+AGG  K  D   L    + +I  A  +G       A L  H     +
Sbjct: 350 AA-LAGHESVVWVAGGQLKGADIDDLIRTHAPRIKAAVVLGVDRAEIVAALAEHAPDAPV 408

Query: 395 NSTLSKTLDQALKSVVRDVENVQLP-SIVLFSPGCASFDQYNNFRERG 441
             T S   ++A++  V    ++  P   VL +P  AS D Y    +RG
Sbjct: 409 TVTDSTDPEEAMEEAVSAAVSLAEPGDTVLLAPAAASLDMYTGMGQRG 456