RPSBLAST alignment for GI: 254781099 and conserved domain: PRK01438
>gnl|CDD|179297 PRK01438, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional. Length = 480
Score = 199 bits (509), Expect = 9e-52
Identities = 125/476 (26%), Positives = 205/476 (43%), Gaps = 35/476 (7%)
Query: 4 SSFRNHSIAVFGLGRSGLSAACALKDSGVHVIAWD--DHPCAVKQAKDMGIEVIDFREIP 61
S ++ + V GLG SG +AA AL + G V D D A + R P
Sbjct: 12 SDWQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGP 71
Query: 62 WSII----SFLVLSPGIALTGENAHWCVKLANQFNVEIIGDIELFVRERRFSSLQSPFIA 117
+ +V SPG + A + + G++EL R R +P++A
Sbjct: 72 GPTLPEDTDLVVTSPGWRPD----APLLAAAADAGIPVWGEVELAWRLRDPDR-PAPWLA 126
Query: 118 VTGTNGKSSTVALISHVLRKNGYDVQLGGNIGLPILNLEYFSPNRF--YVIECSSYQIEL 175
VTGTNGK++TV +++ +LR G GNIG P+L+ P + +E SS+Q+
Sbjct: 127 VTGTNGKTTTVQMLASMLRAAGLRAAAVGNIGTPVLD-AVRDPEGYDVLAVELSSFQLHW 185
Query: 176 TPTIDPSIGVLLNISPDHLDRHHTLENYVNIKKKIVTMSKHAIICIN---DHQCEKIAYD 232
+P++ P +LN++PDHLD H ++E Y K +I + C+ D E + +
Sbjct: 186 SPSVSPHSAAVLNLAPDHLDWHGSMEAYAAAKARI--YEGTTVACVYNVADPATEDLVEE 243
Query: 233 MNF------IGHSISRISSQSLQSDSDLYIDESFL---KCSATSEVIFDFSQETKKHNIQ 283
+ IG ++ L + +D +F+ + SA + + HNI
Sbjct: 244 ADVVEGARAIGFTLGTPGPSQLGVVDGILVDRAFVEDRQTSALELATLEDLRPAAPHNIA 303
Query: 284 NLVTSAVVCMQLGLKVEEIKRALLSCGGLTHRLQTIARLGHVIFINDSKATNLHSVIHAF 343
N + +A + G+ ++ L + HR++ +A V +++DSKATN H+ A
Sbjct: 304 NALAAAALARSFGVPPAAVRDGLRAFRPDAHRIEHVADADGVTWVDDSKATNPHAAA-AS 362
Query: 344 LNEKRRIYWIAGGLSKSDDFSTLFP-FISKIAKAYFIGNSAML----FFHHFGGKINSTL 398
L + WIAGGL+K DF L ++ IG H +
Sbjct: 363 LAAYPSVVWIAGGLAKGADFDDLVRRAAGRLRGVVLIGADRAEIAEALARHAPDVPVVEV 422
Query: 399 SKTLDQALKSVVRDVENVQLP-SIVLFSPGCASFDQYNNFRERGFSFMSQVSEIPG 453
+T A+ V + P VL +P AS D + ++ RG +F + V + G
Sbjct: 423 DRTDTGAMDEAVAAAAKLARPGDTVLLAPAAASMDMFTDYAARGDAFAAAVRALLG 478