RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254781100|ref|YP_003065513.1| phospho-N-acetylmuramoyl-pentapeptide-transferase [Candidatus Liberibacter asiaticus str. psy62] (366 letters) >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} (A:) Length = 306 Score = 27.9 bits (60), Expect = 1.8 Identities = 6/47 (12%), Positives = 12/47 (25%) Query: 48 RSLQEFRGQPVRVPNLPIHARKIDTPTMGGIIILMGLIGSSLLWADF 94 + + H +++L G + SS W Sbjct: 40 LWPVRCKSFYISTRFGQTHVIASGPEDAPPLVLLHGALFSSTXWYPN 86 >3jst_A Putative pterin-4-alpha-carbinolamine dehydratase; lyase, structural genomics, seattle structural genomics center for infectious disease; 2.10A {Brucella melitensis} (A:) Length = 97 Score = 26.7 bits (59), Expect = 4.8 Identities = 4/27 (14%), Positives = 10/27 (37%) Query: 119 IKITTGDAGGLSGKVRILIEFIIAILA 145 + + T G++ + + AI Sbjct: 71 VTLATHSENGVTELDIKMARKMNAIAG 97 >1dk0_A HASA, heme-binding protein A; protein-heme complex, two heme insertions, transport protein; HET: HEM; 1.77A {Serratia marcescens} (A:) Length = 188 Score = 26.3 bits (58), Expect = 6.5 Identities = 10/43 (23%), Positives = 14/43 (32%) Query: 250 SALIGAGIGFLWFNISPAVIFMGDTGSLALGAFIGGIAVSTKH 292 +A + G PA G SL+ G + G S Sbjct: 65 TAFVAGGNLTYTLFNEPAHTLYGQLDSLSFGDGLSGGDTSPYS 107 >2v6u_A Pterin-4A-carbinolamine dehydratase; lyase, enzyme; 1.6A {Toxoplasma gondii} PDB: 2v6s_A 2v6t_A* (A:) Length = 104 Score = 26.3 bits (58), Expect = 6.5 Identities = 8/27 (29%), Positives = 15/27 (55%) Query: 119 IKITTGDAGGLSGKVRILIEFIIAILA 145 ++++T DA GL+ K L +F+ Sbjct: 74 VELSTHDAAGLTEKDFALAKFMDDAAK 100 >1ru0_A DCOH-like protein dcohm; alpha and beta structure, lyase; 1.60A {Mus musculus} (A:) Length = 105 Score = 25.6 bits (56), Expect = 9.9 Identities = 10/27 (37%), Positives = 15/27 (55%) Query: 119 IKITTGDAGGLSGKVRILIEFIIAILA 145 I +T+ D GGL+ + L +FI A Sbjct: 77 ITLTSHDCGGLTKRDVKLAQFIEKAAA 103 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.332 0.148 0.439 Gapped Lambda K H 0.267 0.0570 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 2,792,861 Number of extensions: 124934 Number of successful extensions: 323 Number of sequences better than 10.0: 1 Number of HSP's gapped: 322 Number of HSP's successfully gapped: 30 Length of query: 366 Length of database: 4,956,049 Length adjustment: 90 Effective length of query: 276 Effective length of database: 1,913,599 Effective search space: 528153324 Effective search space used: 528153324 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 55 (25.3 bits)