HHsearch alignment for GI: 254781101 and conserved domain: PRK00421

>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional.
Probab=100.00  E-value=0  Score=403.92  Aligned_cols=369  Identities=27%  Similarity=0.366  Sum_probs=275.3

Q ss_pred             CCCEEEEECCCCCCC------CCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             698899985521245------54469728995998999999999998306993999830365420123346777752011
Q gi|254781101|r   63 KGAGLVVVNTDMVAS------IGSLSIPVFGVDDVLGALNKLAVAARLRSKATIIAITGSVGKTTTKEMLTIALSSIKKT  136 (472)
Q Consensus        63 ~Ga~~~i~~~~~~~~------~~~~~~~~i~v~d~~~al~~la~~~~~~~~~~vI~ITGTnGKTTt~~~l~~iL~~~~~~  136 (472)
T Consensus        66 ~~~d~vV~Sp~I~~~~p~~~~a~~~gi~v~~~--~-e~l~~~---~---~~~~~IaVtGTnGKTTtT~ll~~il~~~g~~  136 (459)
T PRK00421         66 KGADVVVVSSAIKPDNPELVAARELGIPVVRR--A-EMLAEL---M---RLRTSIAVAGTHGKTTTTSLLAHVLAEAGLD  136 (459)
T ss_pred             CCCCEEEECCCCCCCCHHHHHHHHCCCCEEEH--H-HHHHHH---H---HCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf             99999998998599899999999879979889--9-999999---8---2596499977888611899999999976998


Q ss_pred             --CCCHHHHHCCCCCCCHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHC
Q ss_conf             --222122110145741000123221444301566443321121223232202555312101234445788886543310
Q gi|254781101|r  137 --YACIGSYNNHIGVPLTLARMPVDVDFGIFELGMSHLGEIRFLTHLVRPHIAVITTIAPAHLSNFSGIEEIASAKAEIF  214 (472)
Q Consensus       137 --~~t~gn~Nn~iGvpltll~~~~~~~~~V~E~g~~~~gei~~L~~i~~P~iaiiTNI~~dHld~~~s~e~i~~~K~~i~  214 (472)
T Consensus       137 ~~~~iGg~~~~-~~~~---~~~-~~~~~~V~E~dE~d-~--sf--~~~~P~iavitNI~~DHLD~h~s~e~Y~~ak~~~~  206 (459)
T PRK00421        137 PTFIIGGILNA-AGTN---ARL-GSSDYFVAEADESD-R--SF--LKLHPDIAVVTNIDADHLDYYGDFEDLKDAFQEFA  206 (459)
T ss_pred             CEEEECCCCCC-CCCC---CCC-CCCCEEEEEECCCC-C--CH--HHCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHH
T ss_conf             74885753355-6654---525-88988999953541-4--36--44589899991798778656018999999999999


Q ss_pred             CCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC
Q ss_conf             3762210121013424689987520123333322222222222223442113465100124565432-212222222233
Q gi|254781101|r  215 EGLEKTGTIFLNYDDSFFELLKAKSHALGIKTIYSFGKSKNADFQLRKWKQCSEQSWMEVQLQGKSM-EVVHHGIGYHMA  293 (472)
Q Consensus       215 ~~l~~~g~~ViN~Dd~~~~~l~~~~~~~~~~~i~~~g~~~~ad~~~~~i~~~~~~~~~~~~~~~~~~-~~~l~~~G~hnv  293 (472)
T Consensus       207 ~~~~~~g~~ViN~DD~~~~~l~~~~~~----~vitfg~~~~~d~~~~~i~~~~~~~~f~~~~~~~~~~~~~l~l~G~HNv  282 (459)
T PRK00421        207 HNLPFYGALVACGDDPELRELLPRVDR----PVITYGFSEDADFRAENIRQDGGGSHFDVLREGEDLGDFTLPLPGRHNV  282 (459)
T ss_pred             HCCCCCCCEECCCCCHHHHHHHHHCCC----CCEEECCCCCCCEEEEEEEEECCCEEEEEEECCCEEEEEEECCCHHHHH
T ss_conf             719954721146879899998774388----6002356876666788899948923899983893788999568638899


Q ss_pred             CCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             33221035676510121034554311476644331010003653113310002565321012577787411102687138
Q gi|254781101|r  294 QNMLMTLGIVSILTADVDTAIKALSVFHPKEGRGKRYRCALNQGFFTLIDESYNANPASMKAAISVLSQISPHGEGRRIA  373 (472)
Q Consensus       294 ~NalaAia~~~~lGi~~~~i~~~L~~~~~~~GR~~~~~~~~~~~~~~iIDDsYNAnP~S~~aal~~l~~~~~~~~~r~i~  373 (472)
T Consensus       283 ~NalAAia~a~~lGi~~e~i~~aL~~F~Gv~~R~E~v---~~~~gv~~idD-YAH~P~~i~a~l~alr~~~~--~~rii~  356 (459)
T PRK00421        283 LNALAAIAVALELGIDDEAIRKALATFKGVKRRFEEK---GEVNGVVLIDD-YAHHPTEIKATLKAARQKYP--DKRIVA  356 (459)
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEE---EECCCEEEEEE-CCCCHHHHHHHHHHHHHHCC--CCCEEE
T ss_conf             9999999999984999999999997535745027998---72288479973-56893899999999998768--996699


Q ss_pred             EECCHHHCCC--CHHHHHHHHHHHHHHCCCCEEEEE-----------CCCHHHHHHHCCCC--CCEEEECCHHHHHHHHH
Q ss_conf             8512354171--058999999999986499899998-----------80389899851137--97999789899999999
Q gi|254781101|r  374 VLGDMCEMGE--LSQSFHIDLAEVLSLYNISHVWLS-----------GFHVLALKDALPRS--IHVHYSETMDGLFLFIQ  438 (472)
Q Consensus       374 VlG~m~ELG~--~~~~~h~~i~~~~~~~~~d~v~~~-----------G~~~~~~~~~~~~~--~~~~~~~~~e~a~~~l~  438 (472)
T Consensus       357 vfqP----h~~sR~~~~~~e~a~~l~--~aD~vil~~iy~a~E~~~~g~~~~~i~~~i~~~~~~~~~~~~~~~~ai~~~~  430 (459)
T PRK00421        357 VFQP----HRYSRTRDLFDEFAEVLS--DADEVILLDIYAAGEAPIPGVDSEDLARAIRKRGHVDVIFVPDVDDLAELLA  430 (459)
T ss_pred             EECC----CCHHHHHHHHHHHHHHHH--CCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
T ss_conf             9867----420548999999999987--1999998887588887657889999999998608988799699999999999


Q ss_pred             HHCCCCCEEEEECCCHHHHHHHHHHHHHHC
Q ss_conf             844789899997713254899999999850
Q gi|254781101|r  439 SSLVDGDVVVVKSSNSCGFYRLINLLLEEF  468 (472)
Q Consensus       439 ~~~~~gdiVLiKGSr~~~le~iv~~L~~~~  468 (472)
T Consensus       431 ~~a~~gDvVL~~GaGd--~~~~~~~l~~~l  458 (459)
T PRK00421        431 DVLQPGDLVLTMGAGD--ITKLARALLELL  458 (459)
T ss_pred             HHCCCCCEEEEECCCC--HHHHHHHHHHHH
T ss_conf             8589989999979999--899999999965