HHsearch alignment for GI: 254781101 and conserved domain: PRK10773
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed.
Probab=100.00 E-value=0 Score=823.40 Aligned_cols=447 Identities=30% Similarity=0.438 Sum_probs=414.6
Q ss_pred CCCCCCHHHHHHHHCCEEECCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCC
Q ss_conf 95435678899872799952688714746774022237898889716887476888999998698899985521245544
Q gi|254781101|r 1 MNPLWTFHDLLQAIQGHSIGIVPQGFVNGISIDSRSIAPQEAFFAIKGPHYDGHDFILHAVQKGAGLVVVNTDMVASIGS 80 (472)
Q Consensus 1 m~~~~~~~~l~~~~~g~~~~~~~~~~i~~i~~dSr~v~~g~lFval~g~~~DGh~~i~~A~~~Ga~~~i~~~~~~~~~~~ 80 (472)
T Consensus 1 m~~~-~l~~ia~~~~g~l~~~--d~~i~~i~~DSR~v~~g~lFvAl~G~~~DGh~fi~~Ai~~GA~aiv~~~~~-----~ 72 (452)
T PRK10773 1 MISV-TLSQLADILNAELQGA--DITIDAVTTDTRKVTPGCLFVALKGERFDAHDFADQAKAAGAGALLVSRPL-----D 72 (452)
T ss_pred CCCC-CHHHHHHHHCCEEECC--CCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCC-----C
T ss_conf 9647-6999999869999889--815778996587179998899944798997999999998699899984766-----8
Q ss_pred CCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHCCCCCCC
Q ss_conf 69728995998999999999998306993999830365420123346777752011222122110145741000123221
Q gi|254781101|r 81 LSIPVFGVDDVLGALNKLAVAARLRSKATIIAITGSVGKTTTKEMLTIALSSIKKTYACIGSYNNHIGVPLTLARMPVDV 160 (472)
Q Consensus 81 ~~~~~i~v~d~~~al~~la~~~~~~~~~~vI~ITGTnGKTTt~~~l~~iL~~~~~~~~t~gn~Nn~iGvpltll~~~~~~ 160 (472)
T Consensus 73 ~~~~~i~V~d~~~al~~la~~~~~~~~~~vIgITGSnGKTTtk~~i~~iL~~~g~~~~t~gn~n~~iG~p~tl~~~~~~~ 152 (452)
T PRK10773 73 IDLPQLIVKDTRLAFGQLAAWVRQQVPARVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPLTLLRLTPEY 152 (452)
T ss_pred CCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCHH
T ss_conf 99998998999999999999875159975899991699625999999999972884124565268878660765079213
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCC
Q ss_conf 44430156644332112122323220255531210123444578888654331037622101210134246899875201
Q gi|254781101|r 161 DFGIFELGMSHLGEIRFLTHLVRPHIAVITTIAPAHLSNFSGIEEIASAKAEIFEGLEKTGTIFLNYDDSFFELLKAKSH 240 (472)
Q Consensus 161 ~~~V~E~g~~~~gei~~L~~i~~P~iaiiTNI~~dHld~~~s~e~i~~~K~~i~~~l~~~g~~ViN~Dd~~~~~l~~~~~ 240 (472)
T Consensus 153 ~~~v~E~g~~~~gei~~~~~~~~pdiaviTNI~~dHLd~~gs~e~~~~aK~~Lf~~l~~~g~~IlN~Dd~~~~~~~~~~~ 232 (452)
T PRK10773 153 DYAVIELGANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFTGLPENGIAIMNADNNDWLNWQSVIG 232 (452)
T ss_pred HHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHC
T ss_conf 35785323798535676640026675999842477654057699999999999817887989999798767999999837
Q ss_pred CCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHC
Q ss_conf 2333332222222-222222344211346510012456543221222222223333221035676510121034554311
Q gi|254781101|r 241 ALGIKTIYSFGKS-KNADFQLRKWKQCSEQSWMEVQLQGKSMEVVHHGIGYHMAQNMLMTLGIVSILTADVDTAIKALSV 319 (472)
Q Consensus 241 ~~~~~~i~~~g~~-~~ad~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~G~hnv~NalaAia~~~~lGi~~~~i~~~L~~ 319 (472)
T Consensus 233 ~---~~v~~~~~~~~~~d~~~~~i~~~~~g~~f~l~~~~~~~~v~l~l~G~hnv~NalaAiava~~lG~~~~~i~~~L~~ 309 (452)
T PRK10773 233 S---RKVWRFSPNAANSDFTATNIHVTSHGTEFTLHTPTGSVDVLLPLPGRHNIANALAAAALAMSVGATLDAVKAGLAN 309 (452)
T ss_pred C---CEEEEECCCCCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 9---8289980687776189999999189418999967951899970761768998999999999859999999999972
Q ss_pred CCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHC
Q ss_conf 47664433101000365311331000256532101257778741110268713885123541710589999999999864
Q gi|254781101|r 320 FHPKEGRGKRYRCALNQGFFTLIDESYNANPASMKAAISVLSQISPHGEGRRIAVLGDMCEMGELSQSFHIDLAEVLSLY 399 (472)
Q Consensus 320 ~~~~~GR~~~~~~~~~~~~~~iIDDsYNAnP~S~~aal~~l~~~~~~~~~r~i~VlG~m~ELG~~~~~~h~~i~~~~~~~ 399 (472)
T Consensus 310 ~~~v~GRme~i~~---~~g~~iIdDsYNAnP~Sm~aal~~l~~~~----~~ki~VLGdM~ELG~~s~~~H~~v~~~~~~~ 382 (452)
T PRK10773 310 LKAVPGRLFPIQL---AENQLLLDDSYNANVGSMTAAVQVLAEMP----GYRVLVVGDMAELGAESEACHRQVGEAAKAA 382 (452)
T ss_pred CCCCCCCEEEEEC---CCEEEEEEECCCCCHHHHHHHHHHHHHCC----CCEEEEECCHHHCCCHHHHHHHHHHHHHHHC
T ss_conf 8998674079973---87089997425699799999999997577----9769998773772857899999999999976
Q ss_pred CCCEEEEECCCHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCE--EEEECCCHHHHHHHHHHHHHHC
Q ss_conf 99899998803898998511379799978989999999984478989--9997713254899999999850
Q gi|254781101|r 400 NISHVWLSGFHVLALKDALPRSIHVHYSETMDGLFLFIQSSLVDGDV--VVVKSSNSCGFYRLINLLLEEF 468 (472)
Q Consensus 400 ~~d~v~~~G~~~~~~~~~~~~~~~~~~~~~~e~a~~~l~~~~~~gdi--VLiKGSr~~~le~iv~~L~~~~ 468 (472)
T Consensus 383 ~id~v~~vG~~~~~~~~~~~~---~~~f~~~~~~~~~l~~~l~~~~~~~vLvKGSr~~~le~iv~~L~~~~ 450 (452)
T PRK10773 383 GIDRVLSVGKLSQAISTASGV---GEHFADKTALIARLKALLAEQQVITILVKGSRSAAMEEVVRALQEKG 450 (452)
T ss_pred CCCEEEEECHHHHHHHHHCCC---CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 999999988789999874187---63369999999999988744998489998575114999999999625