HHsearch alignment for GI: 254781101 and conserved domain: TIGR02068

>TIGR02068 cya_phycin_syn cyanophycin synthetase; InterPro: IPR011810 Cyanophycin is an insoluble storage polymer for carbon, nitrogen, and energy, found in most Cyanobacteria. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine. The polymer is made by this enzyme, cyanophycin synthetase, and degraded by cyanophycinase. Heterologously expressed cyanophycin synthetase in Escherichia coli produces a closely related, water-soluble polymer with some Arg replaced by Lys. It is unclear whether enzymes that produce soluble cyanophycin-like polymers in vivo in non-Cyanobacterial species should be designated as cyanophycin synthetase itself or as a related enzyme. Cyanophycin synthesis is analogous to polyhydroxyalkanoic acid (PHA) biosynthesis, except that PHA polymers lack nitrogen and may be made under nitrogen-limiting conditions .; GO: 0005524 ATP binding, 0016874 ligase activity, 0009059 macromolecule biosynthetic process.
Probab=100.00  E-value=2e-44  Score=313.29  Aligned_cols=436  Identities=23%  Similarity=0.291  Sum_probs=283.2

Q ss_pred             CHHHHH-HHHCCEEEC-CCCCCEEEEEEEECCCC--------------CCCCEEEECC--------------CCCCCHHH
Q ss_conf             678899-872799952-68871474677402223--------------7898889716--------------88747688
Q gi|254781101|r    6 TFHDLL-QAIQGHSIG-IVPQGFVNGISIDSRSI--------------APQEAFFAIK--------------GPHYDGHD   55 (472)
Q Consensus         6 ~~~~l~-~~~~g~~~~-~~~~~~i~~i~~dSr~v--------------~~g~lFval~--------------g~~~DGh~   55 (472)
T Consensus       334 Ti~eLiG~~~N~DP~RG~Gh~~~Ltki~~D~~~~~~L~kqG~~ldsVp~kG~~-V~Lr~~ANLSTGG~A~DrTDeiHP~~  412 (876)
T TIGR02068       334 TIEELIGEQINKDPLRGDGHDKPLTKIRLDSVAKLVLAKQGLTLDSVPAKGRI-VYLRATANLSTGGVAIDRTDEIHPEN  412 (876)
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCHHHCCCE-EEEECCCCCCCCCEEEECCCCCCHHH
T ss_conf             07664057646777888866778883433079999998549751154540978-88632477445873162257538458


Q ss_pred             HHHHHHHCCCEEE--------EECCCCCCCCCCCCCCEEEECC-HHHHH---------HHHHHHH-------HHCCCCCE
Q ss_conf             8999998698899--------9855212455446972899599-89999---------9999999-------83069939
Q gi|254781101|r   56 FILHAVQKGAGLV--------VVNTDMVASIGSLSIPVFGVDD-VLGAL---------NKLAVAA-------RLRSKATI  110 (472)
Q Consensus        56 ~i~~A~~~Ga~~~--------i~~~~~~~~~~~~~~~~i~v~d-~~~al---------~~la~~~-------~~~~~~~v  110 (472)
T Consensus       413 -~~~a~-~aAk~iGLDiaG~D~v~~di~~PL~~~~G~iVEVNAaPGlrMH~~PS~G~pR~Va~Ai~d~LFP~~~~grIPi  490 (876)
T TIGR02068       413 -IAIAV-RAAKIIGLDIAGVDVVTEDISKPLRDTDGAIVEVNAAPGLRMHLAPSQGKPRNVAKAIVDMLFPEEDDGRIPI  490 (876)
T ss_pred             -HHHHH-HHHHEEEEEECCEEECCCCCCCCHHHCCCEEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEE
T ss_conf             -99998-7520000012122200310003745459729998567663444677774698710268752288878983448


Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHCCCC---CHHHHHCCC----C---CCCHHCC--CCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf             9983036542012334677775201122---212211014----5---7410001--23221444301566443321121
Q gi|254781101|r  111 IAITGSVGKTTTKEMLTIALSSIKKTYA---CIGSYNNHI----G---VPLTLAR--MPVDVDFGIFELGMSHLGEIRFL  178 (472)
Q Consensus       111 I~ITGTnGKTTt~~~l~~iL~~~~~~~~---t~gn~Nn~i----G---vpltll~--~~~~~~~~V~E~g~~~~gei~~L  178 (472)
T Consensus       491 V~vTGTNGKTt~~RL~Ahil~~~G~~vG~T~tDG~Yi~~~~v~~GDntGP~SAr~~L~d~~VdaAVLEta---rGGiLR~  567 (876)
T TIGR02068       491 VAVTGTNGKTTTTRLVAHILKQTGKVVGMTTTDGVYIGKKLVEKGDNTGPKSARRILADPTVDAAVLETA---RGGILRE  567 (876)
T ss_pred             EEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEECCEEEECCCCCCHHHHHHCCCCCCEEEEEEECC---CCCCCCC
T ss_conf             8872689835578899999985698276420376775576662478987157301227888018998627---8722066


Q ss_pred             -CCCCCCCEEEEEEEC-CCHHHHHH--HHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             -223232202555312-10123444--57888865433103762210121013424689987520123333322222222
Q gi|254781101|r  179 -THLVRPHIAVITTIA-PAHLSNFS--GIEEIASAKAEIFEGLEKTGTIFLNYDDSFFELLKAKSHALGIKTIYSFGKSK  254 (472)
Q Consensus       179 -~~i~~P~iaiiTNI~-~dHld~~~--s~e~i~~~K~~i~~~l~~~g~~ViN~Dd~~~~~l~~~~~~~~~~~i~~~g~~~  254 (472)
T Consensus       568 GLafD~c~VGvVtNi~~~DHLG~~dInt~e~La~Vk~vv~e~V~pDG~AVLNA~DP~va~mA~~~~G----~i~YF~~~~  643 (876)
T TIGR02068       568 GLAFDRCDVGVVTNIADGDHLGLGDINTIEDLADVKRVVVEVVKPDGYAVLNADDPMVAAMAEKCKG----KIAYFSMDP  643 (876)
T ss_pred             CCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHEEEEEEEECCCCCEEECCCCCHHHHHHHHCCC----CEEEEECCC
T ss_conf             5010321416898337766357886004788875101267888589827864788557999842896----189862186


Q ss_pred             CCCCCCCC-----CCCCCCCCCCCCCCCC--------CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCC
Q ss_conf             22222344-----2113465100124565--------4322122222222333322103567651012103455431147
Q gi|254781101|r  255 NADFQLRK-----WKQCSEQSWMEVQLQG--------KSMEVVHHGIGYHMAQNMLMTLGIVSILTADVDTAIKALSVFH  321 (472)
Q Consensus       255 ~ad~~~~~-----i~~~~~~~~~~~~~~~--------~~~~~~l~~~G~hnv~NalaAia~~~~lGi~~~~i~~~L~~~~  321 (472)
T Consensus       644 ~~~~~~~H~~~G~~avy~~~G~ivia~G~~~~~~~~~~~iPlT~GG~~~F~ieN~LAA~aAA~~~~v~ie~Ir~G~~tF~  723 (876)
T TIGR02068       644 NNPTVAKHIAKGGRAVYYENGYIVIAKGGAEVAIARIAEIPLTMGGRVAFQIENALAAVAAAWALGVDIELIRAGIRTFK  723 (876)
T ss_pred             CHHHHHHHHHCCCEEEEEECCEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
T ss_conf             25899999855989999867879997478322678997288675771578888999999998534898999998987330


Q ss_pred             ----CCCCCCCCCEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHH
Q ss_conf             ----6644331010003653113310002565321012577787411102687138851235417105899999999998
Q gi|254781101|r  322 ----PKEGRGKRYRCALNQGFFTLIDESYNANPASMKAAISVLSQISPHGEGRRIAVLGDMCEMGELSQSFHIDLAEVLS  397 (472)
Q Consensus       322 ----~~~GR~~~~~~~~~~~~~~iIDDsYNAnP~S~~aal~~l~~~~~~~~~r~i~VlG~m~ELG~~~~~~h~~i~~~~~  397 (472)
T Consensus       724 ~d~~~~PGrfnLFn~~---~~~~lvD--Y~HNp~~~~av~~a~~~~~---A~rr~gV~ggp---GDR~De~l~~~G~~~g  792 (876)
T TIGR02068       724 ADAAQAPGRFNLFNLG---GAHVLVD--YGHNPAAIEAVVEAIRNLP---ARRRIGVIGGP---GDRRDEDLVKLGEILG  792 (876)
T ss_pred             CHHHCCCCEEEEEECC---CCEEEEE--CCCCHHHHHHHHHHHHHCC---CCCEEEEEECC---CCCCHHHHHHHHHHHH
T ss_conf             1010689503222258---8289996--5779789999999996178---78478998078---7786588999999975


Q ss_pred             HCCCCEEEEEC-----------CCHHHHHHHCCCCC-CEEEEC---CHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH
Q ss_conf             64998999988-----------03898998511379-799978---9899999999844789899997713254899999
Q gi|254781101|r  398 LYNISHVWLSG-----------FHVLALKDALPRSI-HVHYSE---TMDGLFLFIQSSLVDGDVVVVKSSNSCGFYRLIN  462 (472)
Q Consensus       398 ~~~~d~v~~~G-----------~~~~~~~~~~~~~~-~~~~~~---~~e~a~~~l~~~~~~gdiVLiKGSr~~~le~iv~  462 (472)
T Consensus       793 ~-~FD~i~~keD~~~rGkR~~G~a~~Ll~~G~~~~~~~~~~i~~i~de~~Ai~~~L~~~~~GdL~vi~~e---~~~~a~~  868 (876)
T TIGR02068       793 G-AFDQIILKEDDDLRGKRARGEAAALLRQGLIQAAMRKAAIEEILDETEAIKAALDSLEAGDLVVILPE---SVERAIK  868 (876)
T ss_pred             H-CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC---CCHHHHH
T ss_conf             4-06879996274535788873589999963530577656799998899999999842146886999702---1003566


Q ss_pred             HHHH
Q ss_conf             9998
Q gi|254781101|r  463 LLLE  466 (472)
Q Consensus       463 ~L~~  466 (472)
T Consensus       869 ~i~~  872 (876)
T TIGR02068       869 LIEE  872 (876)
T ss_pred             HHHH
T ss_conf             7665