HHsearch results for GI: 254781101 and protein with PDBid: 1jbw_A

>1jbw_A Folylpolyglutamate synthase; FPGS folate AMPPCP ternary complex, ligase; HET: KCX ACQ TMF; 1.85A {Lactobacillus casei} SCOP: c.59.1.2 c.72.2.2 PDB: 1fgs_A* 1jbv_A* 2gca_A 2gc5_A* 2gc6_A* 2gcb_A
Probab=100.00  E-value=4.3e-36  Score=256.60  Aligned_cols=353  Identities=17%  Similarity=0.177  Sum_probs=216.8

Q ss_pred             CCEEEECCHHHHHHHHHHHH-HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC---CHH--HHHCCC---CCCCH-
Q ss_conf             72899599899999999999-830699399983036542012334677775201122---212--211014---57410-
Q gi|254781101|r   83 IPVFGVDDVLGALNKLAVAA-RLRSKATIIAITGSVGKTTTKEMLTIALSSIKKTYA---CIG--SYNNHI---GVPLT-  152 (472)
Q Consensus        83 ~~~i~v~d~~~al~~la~~~-~~~~~~~vI~ITGTnGKTTt~~~l~~iL~~~~~~~~---t~g--n~Nn~i---Gvplt-  152 (472)
                      +|........+-+.++.... ..+-+.++||||||||||||+.|++++|+..|..++   |++  ++|..|   |.|++ 
T Consensus        13 ~~~~~~~~~~~r~~~~l~~lg~P~~~~~~I~VTGTNGKTTTs~~l~~iL~~~G~kvG~~tSp~l~~~~eri~~~g~~i~~   92 (428)
T 1jbw_A           13 FPRLAKTGDHRRILTLLHALGNPQQQGRYIHVTGTNGKGSAANAIAHVLEASGLTVGLYTSPFIMRFNERIMIDHEPIPD   92 (428)
T ss_dssp             CCCCCCCSSCHHHHHHHHHTTCGGGSSCEEEEECSSCHHHHHHHHHHHHHHTTCCEEEECSSCSSCGGGGEEETTEECCH
T ss_pred             CCCCCCCCCHHHHHHHHHHCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCEECCH
T ss_conf             77557789879999999974993870998999898227999999999999889988997888747024489999995578


Q ss_pred             ---------------------------H---C-------CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
Q ss_conf             ---------------------------0---0-------12322144430156644332112122323220255531210
Q gi|254781101|r  153 ---------------------------L---A-------RMPVDVDFGIFELGMSHLGEIRFLTHLVRPHIAVITTIAPA  195 (472)
Q Consensus       153 ---------------------------l---l-------~~~~~~~~~V~E~g~~~~gei~~L~~i~~P~iaiiTNI~~d  195 (472)
                                                 -   +       -.....+++++|.|..  +..+ .+.++.|+++++||++.|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~e~~~~--~~~~-~~~~~~~~~~~it~i~~d  169 (428)
T 1jbw_A           93 AALVNAVAFVRAALERLQQQQADFNVTEFEFITALAYWYFRQRQVDVAVIEVGIG--GDTD-STNVITPVVSVLTEVALD  169 (428)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSTTCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSS--STTS-TTCSCCCSEEEECCCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCH--HHCC-CCEEEECCEEEEECCCCH
T ss_conf             9999999998999998875226888868999999999999872674799752302--1104-625741232234044500


Q ss_pred             HHHHHH-HHHHHHHHHHHHCCCCCCCCHHHHCCCCHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             123444-578888654331037622101210134246-899875201233333222222222222234421134651001
Q gi|254781101|r  196 HLSNFS-GIEEIASAKAEIFEGLEKTGTIFLNYDDSF-FELLKAKSHALGIKTIYSFGKSKNADFQLRKWKQCSEQSWME  273 (472)
Q Consensus       196 Hld~~~-s~e~i~~~K~~i~~~l~~~g~~ViN~Dd~~-~~~l~~~~~~~~~~~i~~~g~~~~ad~~~~~i~~~~~~~~~~  273 (472)
                      |.++++ +++.++.+|..++....   ..+.+..++. ..............  +.+   ...++.+........+..+.
T Consensus       170 h~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~  241 (428)
T 1jbw_A          170 HQKLLGHTITAIAKHKAGIIKRGI---PVVTGNLVPDAAAVVAAKVATTGSQ--WLR---FDRDFSVPKAKLHGWGQRFT  241 (428)
T ss_dssp             CHHHHCSSHHHHHHHHGGGCCTTC---CEEECCCCHHHHHHHHHHHHHHTCC--EEE---BTTTEEEEEEEECSSSEEEE
T ss_pred             HHHHHCCCHHHHHHHHHHHHCCCC---CEEECCCCCHHHHHHHHHHHHHCCC--EEE---CCCCCCCCHHHHCCCCCCEE
T ss_conf             898866539999998541332465---3010356714678999999861784--120---25422220111024576113


Q ss_pred             CCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC------CCCHHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEEECC
Q ss_conf             245-6543221222222223333221035676510------121034554311476644331010003653113310002
Q gi|254781101|r  274 VQL-QGKSMEVVHHGIGYHMAQNMLMTLGIVSILT------ADVDTAIKALSVFHPKEGRGKRYRCALNQGFFTLIDESY  346 (472)
Q Consensus       274 ~~~-~~~~~~~~l~~~G~hnv~NalaAia~~~~lG------i~~~~i~~~L~~~~~~~GR~~~~~~~~~~~~~~iIDDsY  346 (472)
                      +.. .+....+.++++|.||++|+++|++++..+|      .+...+..+|+.++ +|||++++.    .+. .+|+| |
T Consensus       242 ~~~~~~~~~~~~~~l~G~~~~~N~~~aia~~~~~~~~~~~~~~~~~i~~~l~~~~-~~gR~e~i~----~~~-~iivD-~  314 (428)
T 1jbw_A          242 YEDQDGRISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWPLTPQNIRQGLAASH-WPARLEKIS----DTP-LIVID-G  314 (428)
T ss_dssp             EEETTEEEEEEEESCCSTHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTCC-CTTSSEEEE----TTT-TEEEE-C
T ss_pred             EECCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC-CCCEEEEEC----CCC-EEEEE-C
T ss_conf             4022100023577875356888899999999998652101014788763430356-687567852----663-79996-6


Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEC--CCHHHHHH-HCCCCCC
Q ss_conf             56532101257778741110268713885123541710589999999999864998999988--03898998-5113797
Q gi|254781101|r  347 NANPASMKAAISVLSQISPHGEGRRIAVLGDMCEMGELSQSFHIDLAEVLSLYNISHVWLSG--FHVLALKD-ALPRSIH  423 (472)
Q Consensus       347 NAnP~S~~aal~~l~~~~~~~~~r~i~VlG~m~ELG~~~~~~h~~i~~~~~~~~~d~v~~~G--~~~~~~~~-~~~~~~~  423 (472)
                      .+||+|+++++++++.+.   .+|.++|+|-+   |++.   ++++++.+... +|.++++.  ...+...+ .++....
T Consensus       315 AHnp~a~~~~l~~l~~~~---~~k~~~V~G~~---gdkD---~~~~~~~~~~~-~d~v~i~~~~~~~r~~~~~~~~~~~~  384 (428)
T 1jbw_A          315 AHNPDGINGLITALKQLF---SQPITVIAGIL---ADKD---YAAMADRLTAA-FSTVYLVPVPGTPRALPEAGYEALHE  384 (428)
T ss_dssp             CCSHHHHHHHHHHHHHHC---SSCCEEEEECS---SSTT---HHHHHHHHHHH-CSEEEECCCSCC--------------
T ss_pred             CCCHHHHHHHHHHHHHHC---CCCCEEEEEEC---CCCC---HHHHHHHHHHH-CCEEEEECCCCCCCCCCHHHHHHHHC
T ss_conf             889999999999999733---99845998531---7979---99999998855-79999999999966470999987621


Q ss_pred             EEEECCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH
Q ss_conf             999789899999999844789899997713254899999999
Q gi|254781101|r  424 VHYSETMDGLFLFIQSSLVDGDVVVVKSSNSCGFYRLINLLL  465 (472)
Q Consensus       424 ~~~~~~~e~a~~~l~~~~~~gdiVLiKGSr~~~le~iv~~L~  465 (472)
                      ....++.++|++.+.+.. ++|.|||.||-.. ...+.+.|+
T Consensus       385 ~~~~~~~~eAi~~a~~~~-~~d~ilI~GS~yl-~g~v~~~l~  424 (428)
T 1jbw_A          385 GRLKDSWQEALAASLNDV-PDQPIVITGSLYL-ASAVRQTLL  424 (428)
T ss_dssp             -CBCSSHHHHHHHHHHHC-TTSCEEEEESHHH-HHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHHC-CCCCEEEECHHHH-HHHHHHHHH
T ss_conf             764588999999999748-9996999767999-999999986