HHsearch results for GI: 254781101 and protein with PDBid: 2iu8_A
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=97.34 E-value=0.00031 Score=45.80 Aligned_cols=98 Identities=9% Similarity=0.069 Sum_probs=70.9
Q ss_pred CCC-CCCHHHHHHHHCCEEECCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCC-
Q ss_conf 954-356788998727999526887147467740222378988897168874768889999986988999855212455-
Q gi|254781101|r 1 MNP-LWTFHDLLQAIQGHSIGIVPQGFVNGISIDSRSIAPQEAFFAIKGPHYDGHDFILHAVQKGAGLVVVNTDMVASI- 78 (472)
Q Consensus 1 m~~-~~~~~~l~~~~~g~~~~~~~~~~i~~i~~dSr~v~~g~lFval~g~~~DGh~~i~~A~~~Ga~~~i~~~~~~~~~- 78 (472)
|++ -+||+|||+.++|++.+ +++..|++++. -...++|+|=|.- . .+|++++.+-.|++++++.+.....
T Consensus 21 m~~~~~tl~eia~~l~~~~~G-~~~~~I~~i~~-l~~a~~~~isF~~-~-----~ky~~~l~~t~A~aviv~~~~~~~~~ 92 (374)
T 2iu8_A 21 MSQSTYSLEQLADFLKVEFQG-NGATLLSGVEE-IEEAKTAHITFLD-N-----EKYAKHLKSSEAGAIIISRTQFQKYR 92 (374)
T ss_dssp CCSCCEEHHHHHHHTTCEEES-CTTCEECEECC-TTTCCTTEEEECC-S-----SSTHHHHHTCCCSEEEEEHHHHHTST
T ss_pred CCCCCEEHHHHHHHHCCEEEC-CCCEEEECCCC-HHHCCCCCEEEEC-C-----HHHHHHHHHCCCEEEEECHHHHHHCC
T ss_conf 788978799999975999978-99808957749-6558998589988-8-----88899987569879995516864411
Q ss_pred CCCCCCEEEECCHHHHHHHHHHHHHHCC
Q ss_conf 4469728995998999999999998306
Q gi|254781101|r 79 GSLSIPVFGVDDVLGALNKLAVAARLRS 106 (472)
Q Consensus 79 ~~~~~~~i~v~d~~~al~~la~~~~~~~ 106 (472)
.....++|.++||+.++.++...+..+.
T Consensus 93 ~~~~~~~i~~~~p~~~fa~~~~~f~~~~ 120 (374)
T 2iu8_A 93 DLNKNFLITSESPSLVFQKCLELFITPV 120 (374)
T ss_dssp TSCSCEEEESSCHHHHHHHHHTTTSCCC
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHHCC
T ss_conf 3368379996598999999999852223