HHsearch results for GI: 254781101 and protein with PDBid: 2x5o_A
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2jfg_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=100.00 E-value=0 Score=393.79 Aligned_cols=385 Identities=21% Similarity=0.240 Sum_probs=271.4
Q ss_pred EEECCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCC------CCCCCCCCEEEECCHHHHHHHHHHHHHH
Q ss_conf 7402223789888971688747688899999869889998552124------5544697289959989999999999983
Q gi|254781101|r 31 SIDSRSIAPQEAFFAIKGPHYDGHDFILHAVQKGAGLVVVNTDMVA------SIGSLSIPVFGVDDVLGALNKLAVAARL 104 (472)
Q Consensus 31 ~~dSr~v~~g~lFval~g~~~DGh~~i~~A~~~Ga~~~i~~~~~~~------~~~~~~~~~i~v~d~~~al~~la~~~~~ 104 (472)
.+|.|...+..-++...+....|+.. ++. -+++.++|++--... .....++|++. +. ++ +..
T Consensus 33 ~~D~~~~~~~~~~l~~~~~~~~~~~~-~~~-~~~~d~vV~SpgI~~~~p~l~~a~~~~i~i~~--~~-----el---~~~ 100 (439)
T 2x5o_A 33 VMDTRMTPPGLDKLPEAVERHTGSLN-DEW-LMAADLIVASPGIALAHPSLSAAADAGIEIVG--DI-----EL---FCR 100 (439)
T ss_dssp EEESSSSCTTGGGSCTTSCEEESSCC-HHH-HHTCSEEEECTTSCTTCHHHHHHHHTTCEEEC--HH-----HH---HHH
T ss_pred EEECCCCCCHHHHHHHCCCEEECCCC-HHH-CCCCCEEEECCCCCCCCHHHHHHHHCCCCEEE--HH-----HH---HHH
T ss_conf 99798992158999848987636879-778-58998999899139999999999985992874--68-----88---876
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 06993999830365420123346777752011222122110145741000123221444301566443321121223232
Q gi|254781101|r 105 RSKATIIAITGSVGKTTTKEMLTIALSSIKKTYACIGSYNNHIGVPLTLARMPVDVDFGIFELGMSHLGEIRFLTHLVRP 184 (472)
Q Consensus 105 ~~~~~vI~ITGTnGKTTt~~~l~~iL~~~~~~~~t~gn~Nn~iGvpltll~~~~~~~~~V~E~g~~~~gei~~L~~i~~P 184 (472)
..+.++||||||||||||++|++++|+..+......|| +|+|.... ..++.+++|+|++..+.+. ...++|
T Consensus 101 ~~~~~~IaVTGT~GKTTTt~~l~~iL~~~~~~~~~~g~----~g~~~~~~-~~~~~~~~vve~~~~~~~~----~~~~~p 171 (439)
T 2x5o_A 101 EAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGN----IGLPALML-LDDECELYVLELSSFQLET----TSSLQA 171 (439)
T ss_dssp HCCSCEEEEECSSSHHHHHHHHHHHHHHTTCCEEEEES----SSBCHHHH-CCTTCCEEEEECCHHHHHT----CCCCCC
T ss_pred HCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCC----CCCCCCCC-CCCCCCEEEEECCCCCCCC----CCCCCC
T ss_conf 35676899878998447999999998763865011355----46730103-3578878999900355345----544476
Q ss_pred CEEEEEEECCCHHHHHHHH-HHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2025553121012344457-888865433103762210121013424689987520123333322222222222223442
Q gi|254781101|r 185 HIAVITTIAPAHLSNFSGI-EEIASAKAEIFEGLEKTGTIFLNYDDSFFELLKAKSHALGIKTIYSFGKSKNADFQLRKW 263 (472)
Q Consensus 185 ~iaiiTNI~~dHld~~~s~-e~i~~~K~~i~~~l~~~g~~ViN~Dd~~~~~l~~~~~~~~~~~i~~~g~~~~ad~~~~~i 263 (472)
+++|||||++||||+|+++ |+|..+|.+++++ .+.+|+|.||+....+.. ....+++||.+..... +
T Consensus 172 ~iavitNi~~dHld~~~~~~e~y~~~k~~i~~~---~~~~v~n~dd~~~~~~~~-----~~~~~~~~g~~~~~~~----~ 239 (439)
T 2x5o_A 172 VAATILNVTEDHMDRYPFGLQQYRAAKLRIYEN---AKVCVVNADDALTMPIRG-----ADERCVSFGVNMGDYH----L 239 (439)
T ss_dssp SEEEECCCCSCCGGGCTTHHHHHHHHHHGGGTT---CSEEEEETTCGGGSCSCC-----CSSCCEEECSSSSSEE----E
T ss_pred CCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCC---CCEEEECCCHHHHHHHHH-----CCCCEEEEECCCCCCC----C
T ss_conf 500102655410353111479999998653036---733664351488999874-----3674467502444332----0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEE
Q ss_conf 11346510012456543221222222223333221035676510121034554311476644331010003653113310
Q gi|254781101|r 264 KQCSEQSWMEVQLQGKSMEVVHHGIGYHMAQNMLMTLGIVSILTADVDTAIKALSVFHPKEGRGKRYRCALNQGFFTLID 343 (472)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~~G~hnv~NalaAia~~~~lGi~~~~i~~~L~~~~~~~GR~~~~~~~~~~~~~~iID 343 (472)
........+.+..+.....+.++++|.||++|+++|++++..+|+++++|.++|++|++++||+|.+. ..+++++||
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~l~l~G~hn~~NalaAia~~~~lGi~~~~i~~~L~~f~gv~~R~e~~~---~~~g~~~id 316 (439)
T 2x5o_A 240 NHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVL---EHNGVRWIN 316 (439)
T ss_dssp EEETTEEEEEETTEEEEEGGGCSCCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHCCCCTTSSEEEE---EETTEEEEE
T ss_pred CCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEE---EECCEEEEE
T ss_conf 00366159983585122222115566055777877999999839969999999975779744268999---509989999
Q ss_pred ECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCC
Q ss_conf 00256532101257778741110268713885123541710589999999999864998999988038989985113797
Q gi|254781101|r 344 ESYNANPASMKAAISVLSQISPHGEGRRIAVLGDMCEMGELSQSFHIDLAEVLSLYNISHVWLSGFHVLALKDALPRSIH 423 (472)
Q Consensus 344 DsYNAnP~S~~aal~~l~~~~~~~~~r~i~VlG~m~ELG~~~~~~h~~i~~~~~~~~~d~v~~~G~~~~~~~~~~~~~~~ 423 (472)
|+||+||+||.++|++++... +..+++| |......|+++++.+.. .++.|+++|++...+.+.... .
T Consensus 317 D~~a~np~a~~~al~~~~~~~-----~~~~i~~-----g~~~~~~~~~l~~~~~~-~~~~v~~~G~~~~~i~~~~~~--~ 383 (439)
T 2x5o_A 317 DSKATNVGSTEAALNGLHVDG-----TLHLLLG-----GDGKSADFSPLARYLNG-DNVRLYCFGRDGAQLAALRPE--V 383 (439)
T ss_dssp CTTCCSHHHHHHHHTTCCCSS-----CEEEEEE-----SBCTTCCCGGGGGGSCS-SSEEEEEESTTHHHHHTTSGG--G
T ss_pred ECCCCCHHHHHHHHHHHHHCC-----CCEEEEC-----CCCCCCCHHHHHHHHHC-CCCEEEEECCCHHHHHHHCCC--C
T ss_conf 537999899999999666448-----8669974-----78864478999999850-488999989898999853777--7
Q ss_pred EEEECCHHHHHHHHHHHCCCCCEEEEE---CC---------CHHHHHHHHHHH
Q ss_conf 999789899999999844789899997---71---------325489999999
Q gi|254781101|r 424 VHYSETMDGLFLFIQSSLVDGDVVVVK---SS---------NSCGFYRLINLL 464 (472)
Q Consensus 424 ~~~~~~~e~a~~~l~~~~~~gdiVLiK---GS---------r~~~le~iv~~L 464 (472)
+.+++++++|++.+.+.+++||+||+. .| ||..|.++|+.|
T Consensus 384 ~~~~~~l~eav~~a~~~~~~gDvVLlSP~~aSfd~f~~~~~RG~~F~~~v~~l 436 (439)
T 2x5o_A 384 AEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKEL 436 (439)
T ss_dssp EEECSSHHHHHHHHGGGCCTTCEEEECCSSBSTTTSSSHHHHHHHHHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 17759899999999985899299997974403023279999999999999986