HHsearch results for GI: 254781101 and protein with PDBid: 2x5o_A

>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2jfg_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=100.00  E-value=0  Score=393.79  Aligned_cols=385  Identities=21%  Similarity=0.240  Sum_probs=271.4

Q ss_pred             EEECCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCC------CCCCCCCCEEEECCHHHHHHHHHHHHHH
Q ss_conf             7402223789888971688747688899999869889998552124------5544697289959989999999999983
Q gi|254781101|r   31 SIDSRSIAPQEAFFAIKGPHYDGHDFILHAVQKGAGLVVVNTDMVA------SIGSLSIPVFGVDDVLGALNKLAVAARL  104 (472)
Q Consensus        31 ~~dSr~v~~g~lFval~g~~~DGh~~i~~A~~~Ga~~~i~~~~~~~------~~~~~~~~~i~v~d~~~al~~la~~~~~  104 (472)
                      .+|.|...+..-++...+....|+.. ++. -+++.++|++--...      .....++|++.  +.     ++   +..
T Consensus        33 ~~D~~~~~~~~~~l~~~~~~~~~~~~-~~~-~~~~d~vV~SpgI~~~~p~l~~a~~~~i~i~~--~~-----el---~~~  100 (439)
T 2x5o_A           33 VMDTRMTPPGLDKLPEAVERHTGSLN-DEW-LMAADLIVASPGIALAHPSLSAAADAGIEIVG--DI-----EL---FCR  100 (439)
T ss_dssp             EEESSSSCTTGGGSCTTSCEEESSCC-HHH-HHTCSEEEECTTSCTTCHHHHHHHHTTCEEEC--HH-----HH---HHH
T ss_pred             EEECCCCCCHHHHHHHCCCEEECCCC-HHH-CCCCCEEEECCCCCCCCHHHHHHHHCCCCEEE--HH-----HH---HHH
T ss_conf             99798992158999848987636879-778-58998999899139999999999985992874--68-----88---876


Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             06993999830365420123346777752011222122110145741000123221444301566443321121223232
Q gi|254781101|r  105 RSKATIIAITGSVGKTTTKEMLTIALSSIKKTYACIGSYNNHIGVPLTLARMPVDVDFGIFELGMSHLGEIRFLTHLVRP  184 (472)
Q Consensus       105 ~~~~~vI~ITGTnGKTTt~~~l~~iL~~~~~~~~t~gn~Nn~iGvpltll~~~~~~~~~V~E~g~~~~gei~~L~~i~~P  184 (472)
                      ..+.++||||||||||||++|++++|+..+......||    +|+|.... ..++.+++|+|++..+.+.    ...++|
T Consensus       101 ~~~~~~IaVTGT~GKTTTt~~l~~iL~~~~~~~~~~g~----~g~~~~~~-~~~~~~~~vve~~~~~~~~----~~~~~p  171 (439)
T 2x5o_A          101 EAQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGN----IGLPALML-LDDECELYVLELSSFQLET----TSSLQA  171 (439)
T ss_dssp             HCCSCEEEEECSSSHHHHHHHHHHHHHHTTCCEEEEES----SSBCHHHH-CCTTCCEEEEECCHHHHHT----CCCCCC
T ss_pred             HCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCC----CCCCCCCC-CCCCCCEEEEECCCCCCCC----CCCCCC
T ss_conf             35676899878998447999999998763865011355----46730103-3578878999900355345----544476


Q ss_pred             CEEEEEEECCCHHHHHHHH-HHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2025553121012344457-888865433103762210121013424689987520123333322222222222223442
Q gi|254781101|r  185 HIAVITTIAPAHLSNFSGI-EEIASAKAEIFEGLEKTGTIFLNYDDSFFELLKAKSHALGIKTIYSFGKSKNADFQLRKW  263 (472)
Q Consensus       185 ~iaiiTNI~~dHld~~~s~-e~i~~~K~~i~~~l~~~g~~ViN~Dd~~~~~l~~~~~~~~~~~i~~~g~~~~ad~~~~~i  263 (472)
                      +++|||||++||||+|+++ |+|..+|.+++++   .+.+|+|.||+....+..     ....+++||.+.....    +
T Consensus       172 ~iavitNi~~dHld~~~~~~e~y~~~k~~i~~~---~~~~v~n~dd~~~~~~~~-----~~~~~~~~g~~~~~~~----~  239 (439)
T 2x5o_A          172 VAATILNVTEDHMDRYPFGLQQYRAAKLRIYEN---AKVCVVNADDALTMPIRG-----ADERCVSFGVNMGDYH----L  239 (439)
T ss_dssp             SEEEECCCCSCCGGGCTTHHHHHHHHHHGGGTT---CSEEEEETTCGGGSCSCC-----CSSCCEEECSSSSSEE----E
T ss_pred             CCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCC---CCEEEECCCHHHHHHHHH-----CCCCEEEEECCCCCCC----C
T ss_conf             500102655410353111479999998653036---733664351488999874-----3674467502444332----0


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEE
Q ss_conf             11346510012456543221222222223333221035676510121034554311476644331010003653113310
Q gi|254781101|r  264 KQCSEQSWMEVQLQGKSMEVVHHGIGYHMAQNMLMTLGIVSILTADVDTAIKALSVFHPKEGRGKRYRCALNQGFFTLID  343 (472)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~~~l~~~G~hnv~NalaAia~~~~lGi~~~~i~~~L~~~~~~~GR~~~~~~~~~~~~~~iID  343 (472)
                      ........+.+..+.....+.++++|.||++|+++|++++..+|+++++|.++|++|++++||+|.+.   ..+++++||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~l~l~G~hn~~NalaAia~~~~lGi~~~~i~~~L~~f~gv~~R~e~~~---~~~g~~~id  316 (439)
T 2x5o_A          240 NHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGLPHRFEVVL---EHNGVRWIN  316 (439)
T ss_dssp             EEETTEEEEEETTEEEEEGGGCSCCSHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHCCCCTTSSEEEE---EETTEEEEE
T ss_pred             CCCCCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEE---EECCEEEEE
T ss_conf             00366159983585122222115566055777877999999839969999999975779744268999---509989999


Q ss_pred             ECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCCCC
Q ss_conf             00256532101257778741110268713885123541710589999999999864998999988038989985113797
Q gi|254781101|r  344 ESYNANPASMKAAISVLSQISPHGEGRRIAVLGDMCEMGELSQSFHIDLAEVLSLYNISHVWLSGFHVLALKDALPRSIH  423 (472)
Q Consensus       344 DsYNAnP~S~~aal~~l~~~~~~~~~r~i~VlG~m~ELG~~~~~~h~~i~~~~~~~~~d~v~~~G~~~~~~~~~~~~~~~  423 (472)
                      |+||+||+||.++|++++...     +..+++|     |......|+++++.+.. .++.|+++|++...+.+....  .
T Consensus       317 D~~a~np~a~~~al~~~~~~~-----~~~~i~~-----g~~~~~~~~~l~~~~~~-~~~~v~~~G~~~~~i~~~~~~--~  383 (439)
T 2x5o_A          317 DSKATNVGSTEAALNGLHVDG-----TLHLLLG-----GDGKSADFSPLARYLNG-DNVRLYCFGRDGAQLAALRPE--V  383 (439)
T ss_dssp             CTTCCSHHHHHHHHTTCCCSS-----CEEEEEE-----SBCTTCCCGGGGGGSCS-SSEEEEEESTTHHHHHTTSGG--G
T ss_pred             ECCCCCHHHHHHHHHHHHHCC-----CCEEEEC-----CCCCCCCHHHHHHHHHC-CCCEEEEECCCHHHHHHHCCC--C
T ss_conf             537999899999999666448-----8669974-----78864478999999850-488999989898999853777--7


Q ss_pred             EEEECCHHHHHHHHHHHCCCCCEEEEE---CC---------CHHHHHHHHHHH
Q ss_conf             999789899999999844789899997---71---------325489999999
Q gi|254781101|r  424 VHYSETMDGLFLFIQSSLVDGDVVVVK---SS---------NSCGFYRLINLL  464 (472)
Q Consensus       424 ~~~~~~~e~a~~~l~~~~~~gdiVLiK---GS---------r~~~le~iv~~L  464 (472)
                      +.+++++++|++.+.+.+++||+||+.   .|         ||..|.++|+.|
T Consensus       384 ~~~~~~l~eav~~a~~~~~~gDvVLlSP~~aSfd~f~~~~~RG~~F~~~v~~l  436 (439)
T 2x5o_A          384 AEQTETMEQAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKEL  436 (439)
T ss_dssp             EEECSSHHHHHHHHGGGCCTTCEEEECCSSBSTTTSSSHHHHHHHHHHHHHHH
T ss_pred             EEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             17759899999999985899299997974403023279999999999999986