HHsearch results for GI: 254781101 and protein with PDBid: 3eag_A
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- MESO-diaminopimelate ligase; structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis MC58}
Probab=100.00 E-value=7.7e-41 Score=288.01 Aligned_cols=211 Identities=19% Similarity=0.217 Sum_probs=168.7
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCC-----CCHHHHHCCCCCCCHHCCC-CCCCHHHHHCCCCCCCCCCCCCC
Q ss_conf 69939998303654201233467777520112-----2212211014574100012-32214443015664433211212
Q gi|254781101|r 106 SKATIIAITGSVGKTTTKEMLTIALSSIKKTY-----ACIGSYNNHIGVPLTLARM-PVDVDFGIFELGMSHLGEIRFLT 179 (472)
Q Consensus 106 ~~~~vI~ITGTnGKTTt~~~l~~iL~~~~~~~-----~t~gn~Nn~iGvpltll~~-~~~~~~~V~E~g~~~~gei~~L~ 179 (472)
.+.++||||||||||||++|++++|+..|... ...+|+++.+++|.+.... ..+.+|+|+|++.++.+++..++
T Consensus 106 ~~~~vIaVTGTnGKTTTt~mi~~iL~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~E~~~~~~~~~~~~~ 185 (326)
T 3eag_A 106 HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPNSQSPFFVIEADEYDTAFFDKRS 185 (326)
T ss_dssp GGSEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEECSSEETTSSCSEECCCCCSSCTTSCCCEEEEECCCSEEETTEEEE
T ss_pred CCCCEEEEECCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEC
T ss_conf 56737999468995549999999998619983111455322457600135554444455673222221576535677403
Q ss_pred CC--CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 23--2322025553121012344457888865433103762210121013424689987520123333322222222222
Q gi|254781101|r 180 HL--VRPHIAVITTIAPAHLSNFSGIEEIASAKAEIFEGLEKTGTIFLNYDDSFFELLKAKSHALGIKTIYSFGKSKNAD 257 (472)
Q Consensus 180 ~i--~~P~iaiiTNI~~dHld~~~s~e~i~~~K~~i~~~l~~~g~~ViN~Dd~~~~~l~~~~~~~~~~~i~~~g~~~~ad 257 (472)
++ ++|+++|||||++||||+|+|+|+|+++|.++++.+++++.+|+|.||+....+..+... ..+++|+.+...+
T Consensus 186 ~~~~~~p~iaviTNI~~DHLd~~~s~e~y~~~k~~~~~~~~~~g~~v~n~d~~~~~~~~~~~~~---~~~~~~~~~~~~~ 262 (326)
T 3eag_A 186 KFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHYLVRTVPSEGLIVCNGRQQSLQDTLDKGCW---TPVEKFGTEHGWQ 262 (326)
T ss_dssp GGGGSCCSEEEECCCCCCCTTTSSSHHHHHHHHHHHHTTSCTTSEEEEESSCHHHHHHHTTCCC---SCEEEESSSSSEE
T ss_pred CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCC---CCCCCCCCCHHHH
T ss_conf 4434689789996444542243489999999999999743657389993787899999865213---5520025420222
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCC
Q ss_conf 223442113465100124565432-2122222222333322103567651012103455431147664
Q gi|254781101|r 258 FQLRKWKQCSEQSWMEVQLQGKSM-EVVHHGIGYHMAQNMLMTLGIVSILTADVDTAIKALSVFHPKE 324 (472)
Q Consensus 258 ~~~~~i~~~~~~~~~~~~~~~~~~-~~~l~~~G~hnv~NalaAia~~~~lGi~~~~i~~~L~~~~~~~ 324 (472)
+.... ....|.+...++.. ++.++++|+||++|+++|+++|..+|+++++|.++|++|+++.
T Consensus 263 ~~~~~-----~~~~~~~~~~~~~~~~~~l~l~G~HNv~NalaAia~a~~lGi~~~~i~~aL~~F~GV~ 325 (326)
T 3eag_A 263 AGEAN-----ADGSFDVLLDGKTAGRVKWDLMGRHNRMNALAVIAAARHVGVDIQTACEALGAFKNVK 325 (326)
T ss_dssp EEEEC-----TTSCEEEEETTEEEEEECCCCCSHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTCCCEE
T ss_pred HHHHC-----CCCEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
T ss_conf 33314-----7716999999918899997865299999999999999984999999999974698989