HHsearch results for GI: 254781101 and protein with PDBid: 3nrs_A
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A*
Probab=100.00 E-value=4.8e-40 Score=282.75 Aligned_cols=325 Identities=18% Similarity=0.197 Sum_probs=205.5
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHH-----HHHCCCC------------------------CCCHHCC
Q ss_conf 0699399983036542012334677775201122212-----2110145------------------------7410001
Q gi|254781101|r 105 RSKATIIAITGSVGKTTTKEMLTIALSSIKKTYACIG-----SYNNHIG------------------------VPLTLAR 155 (472)
Q Consensus 105 ~~~~~vI~ITGTnGKTTt~~~l~~iL~~~~~~~~t~g-----n~Nn~iG------------------------vpltll~ 155 (472)
+.+.++|+||||||||||++|++++|++.|..++..+ ++|..|. ++++.+.
T Consensus 49 ~~~~~vI~VtGTNGKtSt~~~i~~iL~~~g~kvG~~tSPhl~~~~Eri~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~e 128 (437)
T 3nrs_A 49 KPAPKIFTVAGTNGKGTTCCTLEAILLAAGLRVGVYSSPHLLRYTERVRIQGQELSEAEHSHSFAQIEAGRGDISLTYFE 128 (437)
T ss_dssp CSSSEEEEEECSSSHHHHHHHHHHHHHHTTCCEEEECCCCSSCGGGGEEETTEECCHHHHHHHHHHHHHHHTTCCCCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCEECCHHHHHHHHHHHHHCCCCCCCCHHH
T ss_conf 00398899977830899999999999987998799788841501236998996426899878876433204788877478
Q ss_pred ----------CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHH-HHHHHHHHHHHHCCCCCCCCHHH
Q ss_conf ----------2322144430156644332112122323220255531210123444-57888865433103762210121
Q gi|254781101|r 156 ----------MPVDVDFGIFELGMSHLGEIRFLTHLVRPHIAVITTIAPAHLSNFS-GIEEIASAKAEIFEGLEKTGTIF 224 (472)
Q Consensus 156 ----------~~~~~~~~V~E~g~~~~gei~~L~~i~~P~iaiiTNI~~dHld~~~-s~e~i~~~K~~i~~~l~~~g~~V 224 (472)
.....|++|+|+|+ .|+.++ +++++|+++|||||+.||+|+|| ++++|+.+|+.+++...+ .++
T Consensus 129 ~~~~~a~~~~~~~~~d~~i~E~g~--gg~~d~-t~~~~~~~~viTnI~~DH~d~lg~t~~~Ia~~K~~i~k~~~~--~~~ 203 (437)
T 3nrs_A 129 FGTLSALQLFKQAKLDVVILEVGL--GGRLDA-TNIVDSDVAAITSIALDHTDWLGYDRESIGREKAGVFRGGKP--AVV 203 (437)
T ss_dssp HHHHHHHHHHHHTCCSEEEEECSS--SSTTSG-GGGSCCSEEEECCCCCCBCCCTTCSHHHHHHHHGGGCCTTSE--EEE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCC--HHHHCC-CCCCCCCEEEECCCCHHHHHHCCCHHHHHHHHHHCCCCCCCC--CCC
T ss_conf 899999999975698589970471--344177-525654415661424206765141489999996163136986--311
Q ss_pred HCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 01342468998752012333332222222222-22234421134651001245654322122222222333322103567
Q gi|254781101|r 225 LNYDDSFFELLKAKSHALGIKTIYSFGKSKNA-DFQLRKWKQCSEQSWMEVQLQGKSMEVVHHGIGYHMAQNMLMTLGIV 303 (472)
Q Consensus 225 iN~Dd~~~~~l~~~~~~~~~~~i~~~g~~~~a-d~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~G~hnv~NalaAia~~ 303 (472)
.+.+.+. .+...+..... .++.++..... +.........................+.....+.||+.|+++|++++
T Consensus 204 ~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~na~~a~a~~ 280 (437)
T 3nrs_A 204 GEPDMPQ--SIADVAAELGA-QLYRRDVAWKFSQQEPFDQQEPVDQQINGWHWQCGERQLTGLPVPNVPLANAATALAVL 280 (437)
T ss_dssp CCSSCCH--HHHHHHHHHTC-EEEEBTTTEEEEC--------------CCEEEEETTEEEEEECCCSSCHHHHHHHHHHH
T ss_pred CCCCCHH--HHHHHHHHHCC-CEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 3333246--79999987177-30104742222122301222232222244201354100102115579999999876655
Q ss_pred HHHCCCCH--HHHHHHHCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH----CCCCCCEEEECC
Q ss_conf 65101210--345543114766443310100036531133100025653210125777874111----026871388512
Q gi|254781101|r 304 SILTADVD--TAIKALSVFHPKEGRGKRYRCALNQGFFTLIDESYNANPASMKAAISVLSQISP----HGEGRRIAVLGD 377 (472)
Q Consensus 304 ~~lGi~~~--~i~~~L~~~~~~~GR~~~~~~~~~~~~~~iIDDsYNAnP~S~~aal~~l~~~~~----~~~~r~i~VlG~ 377 (472)
..++++.. .+..++. ...+|||+|++. .++..++| |-+||+|+++.+++++++.. ...+|.++|+|.
T Consensus 281 ~~~~~~i~~~~~~~~~~-~~~~pGR~e~i~----~~~~~ilD--~AHNp~a~~~l~~~l~~~~~~~~~~~~~ki~~V~G~ 353 (437)
T 3nrs_A 281 HYSELPLSDEAIRQGLQ-AASLPGRFQVVS----EQPLLILD--VAHNPHAARYLVNRLAQVINPVNASKQGKVRAVVGM 353 (437)
T ss_dssp HHHTCCCCHHHHHHHHH-HCCCTTSSEEEE----TTTEEEEC--CCCSHHHHHHHHHHHHHTC--------CCEEEEECC
T ss_pred HHCCCCCCHHHHHHHHC-CCCCCCCEEEEC----CCCCEEEE--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 43033441999987531-257688511550----46745662--477889999999999998644430147986999643
Q ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCEEEEECC------CHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 35417105899999999998649989999880------389899851137979997898999999998447898999977
Q gi|254781101|r 378 MCEMGELSQSFHIDLAEVLSLYNISHVWLSGF------HVLALKDALPRSIHVHYSETMDGLFLFIQSSLVDGDVVVVKS 451 (472)
Q Consensus 378 m~ELG~~~~~~h~~i~~~~~~~~~d~v~~~G~------~~~~~~~~~~~~~~~~~~~~~e~a~~~l~~~~~~gdiVLiKG 451 (472)
|+ ++. ++++.+.+.. .+|.++++.. ....+.+.+ .....++++++|++.+.+.+.++|+|||.|
T Consensus 354 ~~---dKd---~~~~l~~l~~-~~~~ii~~~~d~~r~~~~~~l~~~~---~~~~~~~~~~eAi~~a~~~a~~~d~vLI~G 423 (437)
T 3nrs_A 354 LS---DKD---IAGTLACLSE-RVDEWYCAPLEGPRGASAGQLAEHL---VSARQFSDVETAWRQAMQDADTQDVVIVCG 423 (437)
T ss_dssp BT---TBC---HHHHHHHHTT-TCCEEEECCCSSTTBCCHHHHHTTC---SSCEECSSHHHHHHHHHHHCCTTCEEEEES
T ss_pred CC---CCC---HHHHHHHHHH-HCCEEEEECCCCCCCCCHHHHHHHH---HHCCCCCCHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 58---889---9999999885-5899999799997779999999988---757636999999999998479988699971
Q ss_pred CCH
Q ss_conf 132
Q gi|254781101|r 452 SNS 454 (472)
Q Consensus 452 Sr~ 454 (472)
|-.
T Consensus 424 Sly 426 (437)
T 3nrs_A 424 SFH 426 (437)
T ss_dssp SHH
T ss_pred HHH
T ss_conf 699