RPSBLAST alignment for GI: 254781101 and conserved domain: TIGR01085

>gnl|CDD|162196 TIGR01085, murE, UDP-N-acetylmuramyl-tripeptide synthetase. A close homolog, scoring just below the trusted cutoff, is found (with introns) in Arabidopsis thaliana. Its role is unknown. Length = 464
 Score =  105 bits (265), Expect = 2e-23
 Identities = 99/380 (26%), Positives = 153/380 (40%), Gaps = 48/380 (12%)

Query: 27  VNGISIDSRSIAPQEAFFAIKGPHYDGHDFILHAVQKGAGLVVVNTDMVASIGSLSIPVF 86
           V G+++DSR + P + F AIKG H DGHDFI  A+  GA  VVV  D         +PV 
Sbjct: 4   VTGLTLDSREVKPGDLFVAIKGTHVDGHDFIHDAIANGAVAVVVERD--VDFYVAPVPVI 61

Query: 87  GVDDVLGALNKLA--VAARLRSKATIIAITGSVGKTTTKEMLTIALSSIKKTYACIGSYN 144
            V D+  AL+ LA         K  +I +TG+ GKTTT  ++   L  + K    IG+  
Sbjct: 62  IVPDLRHALSSLAAAFYGHPSKKLKVIGVTGTNGKTTTTSLIAQLLRLLGKKTGLIGTIG 121

Query: 145 NHIG------------------VPLTLARMPVD-VDFGIFELGMSH------LGEIRFLT 179
             +G                  +  TLA M      + + E+  SH      +  +RF  
Sbjct: 122 YRLGGNDLIKNPAALTTPEALTLQSTLAEMVEAGAQYAVMEVS-SHALAQGRVRGVRFD- 179

Query: 180 HLVRPHIAVITTIAPAHLSNFSG-IEEIASAKAEIFEGLEKTGTIFLNYDDSF-FELLKA 237
                  AV T ++  HL +F G +E   +AKA +F  L       +N DD +  + +K 
Sbjct: 180 ------AAVFTNLSRDHL-DFHGTMENYFAAKASLFTELGLKRFAVINLDDEYGAQFVKR 232

Query: 238 KSHALGIKTIYSFGKSKNADFQLRKWKQCSEQSWMEVQLQGKSMEVVHHGIGYHMAQNML 297
               + +  I      +  D ++       E      +       +    IG     N+L
Sbjct: 233 LPKDITVSAITQPADGRAQDIKITDSGYSFEGQQFTFETPAGEGHLHTPLIGRFNVYNLL 292

Query: 298 MTLGIV-SILTADVDTAIKALSVFHPKEGRGKRYRCALNQGFFTLIDESYNANPASMKAA 356
             L  +  +   D++  + AL  F    GR +       Q F  ++D  Y   P +++  
Sbjct: 293 AALATLLHLGGIDLEDIVAALEKFRGVPGRMELVD--GGQKFLVIVD--YAHTPDALE-- 346

Query: 357 ISVLSQISPHGEGRRIAVLG 376
              L  +  H +GR I V G
Sbjct: 347 -KALRTLRKHKDGRLIVVFG 365