HHsearch alignment for GI: 254781102 and conserved domain: COG0769

>COG0769 MurE UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].
Probab=100.00  E-value=0  Score=732.03  Aligned_cols=455  Identities=41%  Similarity=0.605  Sum_probs=415.3

Q ss_pred             EEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHH
Q ss_conf             02453023146898899803887676888999998598899984732233343223479709997998999999999982
Q gi|254781102|r   31 NEVSSDSRHIQAGWIFVAIVGNKEDGHLFIPQAIAQGAEAIVVSSAYSLQDFSATIRSNTPILVVDNTRKFLSLFASRLY  110 (497)
Q Consensus        31 ~~i~~DSr~v~~g~lFval~G~~~dGh~fi~~A~~~GA~~~i~~~~~~~~~~~~~~~~~~p~i~V~d~~~aL~~la~~~~  110 (497)
T Consensus        11 ~~l~~dsr~v~~g~lf~a~~g~~~~g~~~~~~a~~~Gavav~~~~~~~------~~~~~~~vi~V~~~~~~~~~~a~~~y   84 (475)
T COG0769          11 TGLTLDSRKVKEGDLFVAKPGTKVDGHDFIAGAIAPGAVAVVVEKDIK------LAEAGVPVIVVTGTNGKLTTLALAFY   84 (475)
T ss_pred             CCCCCCHHHCCCCCEEEEEECCCCCCCCCCHHHHHCCCEEEEECCCCC------CCCCCCCEEEECCCHHHHHHHHHHHC
T ss_conf             576223656376847999732352453440657628977999705555------54567877998685377788899852


Q ss_pred             CCCCC--CEEEEEEEECCCEEHHHHHHHHHHCCCCCCCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf             76200--224565430652000123333321023222223454433--23554457675312211111110112233333
Q gi|254781102|r  111 GKHPE--NILAVTGTSGKSSVASFVQQICQRSGLSSFQIGPTSTIS--SFAQDNRLTTPSPIYLAKALSYLSSQGVTHVS  186 (497)
Q Consensus       111 ~~~~~--~vIgITGTnGKTTt~~~l~~iL~~~g~~~~~~g~~~~~~--~~~~~~~~TtP~~~~l~~~l~~~~~~g~~~~v  186 (497)
T Consensus        85 ~~ps~~l~vigvTGTNgKTt~t~~~~~~~~~~g~~~~~~gT~g~~~~~~~~~~~~~tTP~~~~l~~~~~~~~d~~~e~~v  164 (475)
T COG0769          85 GLPSGKLKVIGVTGTNGKTTTTSLLAQILKKLGKKTALIGTEGDELSPGILEPTGLTTPEALDLQNLLRDLLDRGAEIAV  164 (475)
T ss_pred             CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf             38657851898638785799999999998862982589997766326886345667892178999999999973880999


Q ss_pred             CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
Q ss_conf             56676665554310432121112321545543211011223455421000000122321112542000122210235653
Q gi|254781102|r  187 VEASSHGLDQHRLDGIKLIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHNAGCR  266 (497)
Q Consensus       187 lEvSS~gl~~~rl~~i~~diaviTNI~~dHLd~~gs~e~y~~aK~~If~~~~~~~~~~ViN~Dd~~~~~l~~~~~~~~~~  266 (497)
T Consensus       165 mEvssh~l~~~Rv~~~~f~v~~ftnls~DHlD~h~t~e~Y~~aK~~lf~-~~~~~~~~Vin~dd~~~~~~~~~~~~~~~~  243 (475)
T COG0769         165 MEVSSHGLVQGRVEGVTFDVGVFTNLSRDHLDYHGTMEYYGAAKAVLFE-SLPHSGEAVINPDDGHGLDYKERLKNALGD  243 (475)
T ss_pred             EEECHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHH-CCCCCCCEEECCCCCHHHHHHHHHHHCCCC
T ss_conf             8850347975786563598864566566665235749999988987764-057887479877880388899999856887


Q ss_pred             CCCCCCCCCCCCCC--EECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf             22222333322000--0001454443211222100101223433222110577888775202676763111234433455
Q gi|254781102|r  267 VLSVGYQGKFIHLK--KVCAIHNKQQVTISVEGKDFDFLFPLPGEFQVYNALVAAGLCIAIGIDSALVLEHLEKLHVVPG  344 (497)
Q Consensus       267 ~~~~g~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~l~l~G~hni~NalaAia~a~~lGi~~~~i~~~L~~f~~~~g  344 (497)
T Consensus       244 ~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~~L~G~fNv~NaLaA~a~~~~lG~~~e~i~~~l~~~~~v~G  323 (475)
T COG0769         244 YITYGCDFKRPDLDYRGIEESSSGSDFVFEPSGGIGEYELPLPGLFNVYNALAAVAAALALGVDLEDILAGLETLKPVPG  323 (475)
T ss_pred             EEEECCCCCCCCHHHCCCEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
T ss_conf             89968899631212226114213540588637873268604122778999999999998749999999999974689998


Q ss_pred             HHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf             21000135578602300037868999974121100234440354026654600468999999861989999088798989
Q gi|254781102|r  345 RFEFVGTNSRGGRIYVDYAHTSNSLEMILKNIRTITSGRIIVVFGCGGDRDQGKRPIMGKIALDLADIAIVTDDNPRSED  424 (497)
Q Consensus       345 R~E~i~~~~~~~~viiDyahNP~s~~~aL~~l~~~~~~r~i~V~G~~Gdrd~~kr~~mg~~a~~~ad~vi~t~d~~r~e~  424 (497)
T Consensus       324 RmE~v~~~--~~~v~VDyAHnPd~le~~L~~~~~~~~g~li~VfG~gGDrD~~kr~~mg~ia~~~ad~vivt~dnpR~ed  401 (475)
T COG0769         324 RMELVNIG--GKLVIVDYAHNPDGLEKALRAVRLHAAGRLIVVFGCGGDRDKSKRPDMGAIAEQLADIVIVTSDNPRSED  401 (475)
T ss_pred             CEEEECCC--CCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCC
T ss_conf             60687389--9769999534869999999998753498489997766887534303159999855993699189988768


Q ss_pred             HHHHHHHHHHCCCC---EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCEECCCCHHHHHHHHHHH
Q ss_conf             89999999834798---099789899999999965898899994468866358449788679989999998443
Q gi|254781102|r  425 PEKIRAEIIHGIPG---FIEKGNRIEAIRTAIEMLNKQDVLVVAGKGHETVHIVTNGEKKMSVDCDIIREILGL  495 (497)
Q Consensus       425 ~~~I~~~i~~g~~~---~~~~~dr~eAi~~A~~~a~~gDvili~GkG~e~~~~~~~~~~~~~~d~~~~~~~l~~  495 (497)
T Consensus       402 p~~i~~~i~~g~~~~~~~~~~~dr~~AI~~ai~~a~~~D~vliagkGhe~yq~~~~-~~~~f~d~~~v~~~l~~  474 (475)
T COG0769         402 PAVILADILAGIEAPEKYEIIEDREEAIRKALDLAKEGDVVLIAGKGHETYQIMLE-LKRPFDDREVVREALLE  474 (475)
T ss_pred             HHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHC-CEEECCCHHHHHHHHHH
T ss_conf             89999999836476641430110999999999863248878996423513563740-35633868999999843