HHsearch alignment for GI: 254781102 and conserved domain: COG0769
>COG0769 MurE UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].
Probab=100.00 E-value=0 Score=732.03 Aligned_cols=455 Identities=41% Similarity=0.605 Sum_probs=415.3
Q ss_pred EEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHH
Q ss_conf 02453023146898899803887676888999998598899984732233343223479709997998999999999982
Q gi|254781102|r 31 NEVSSDSRHIQAGWIFVAIVGNKEDGHLFIPQAIAQGAEAIVVSSAYSLQDFSATIRSNTPILVVDNTRKFLSLFASRLY 110 (497)
Q Consensus 31 ~~i~~DSr~v~~g~lFval~G~~~dGh~fi~~A~~~GA~~~i~~~~~~~~~~~~~~~~~~p~i~V~d~~~aL~~la~~~~ 110 (497)
T Consensus 11 ~~l~~dsr~v~~g~lf~a~~g~~~~g~~~~~~a~~~Gavav~~~~~~~------~~~~~~~vi~V~~~~~~~~~~a~~~y 84 (475)
T COG0769 11 TGLTLDSRKVKEGDLFVAKPGTKVDGHDFIAGAIAPGAVAVVVEKDIK------LAEAGVPVIVVTGTNGKLTTLALAFY 84 (475)
T ss_pred CCCCCCHHHCCCCCEEEEEECCCCCCCCCCHHHHHCCCEEEEECCCCC------CCCCCCCEEEECCCHHHHHHHHHHHC
T ss_conf 576223656376847999732352453440657628977999705555------54567877998685377788899852
Q ss_pred CCCCC--CEEEEEEEECCCEEHHHHHHHHHHCCCCCCCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 76200--224565430652000123333321023222223454433--23554457675312211111110112233333
Q gi|254781102|r 111 GKHPE--NILAVTGTSGKSSVASFVQQICQRSGLSSFQIGPTSTIS--SFAQDNRLTTPSPIYLAKALSYLSSQGVTHVS 186 (497)
Q Consensus 111 ~~~~~--~vIgITGTnGKTTt~~~l~~iL~~~g~~~~~~g~~~~~~--~~~~~~~~TtP~~~~l~~~l~~~~~~g~~~~v 186 (497)
T Consensus 85 ~~ps~~l~vigvTGTNgKTt~t~~~~~~~~~~g~~~~~~gT~g~~~~~~~~~~~~~tTP~~~~l~~~~~~~~d~~~e~~v 164 (475)
T COG0769 85 GLPSGKLKVIGVTGTNGKTTTTSLLAQILKKLGKKTALIGTEGDELSPGILEPTGLTTPEALDLQNLLRDLLDRGAEIAV 164 (475)
T ss_pred CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 38657851898638785799999999998862982589997766326886345667892178999999999973880999
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
Q ss_conf 56676665554310432121112321545543211011223455421000000122321112542000122210235653
Q gi|254781102|r 187 VEASSHGLDQHRLDGIKLIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAIIYADDAYSKEVMKRAHNAGCR 266 (497)
Q Consensus 187 lEvSS~gl~~~rl~~i~~diaviTNI~~dHLd~~gs~e~y~~aK~~If~~~~~~~~~~ViN~Dd~~~~~l~~~~~~~~~~ 266 (497)
T Consensus 165 mEvssh~l~~~Rv~~~~f~v~~ftnls~DHlD~h~t~e~Y~~aK~~lf~-~~~~~~~~Vin~dd~~~~~~~~~~~~~~~~ 243 (475)
T COG0769 165 MEVSSHGLVQGRVEGVTFDVGVFTNLSRDHLDYHGTMEYYGAAKAVLFE-SLPHSGEAVINPDDGHGLDYKERLKNALGD 243 (475)
T ss_pred EEECHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHH-CCCCCCCEEECCCCCHHHHHHHHHHHCCCC
T ss_conf 8850347975786563598864566566665235749999988987764-057887479877880388899999856887
Q ss_pred CCCCCCCCCCCCCC--EECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 22222333322000--0001454443211222100101223433222110577888775202676763111234433455
Q gi|254781102|r 267 VLSVGYQGKFIHLK--KVCAIHNKQQVTISVEGKDFDFLFPLPGEFQVYNALVAAGLCIAIGIDSALVLEHLEKLHVVPG 344 (497)
Q Consensus 267 ~~~~g~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~l~l~G~hni~NalaAia~a~~lGi~~~~i~~~L~~f~~~~g 344 (497)
T Consensus 244 ~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~~~~~~L~G~fNv~NaLaA~a~~~~lG~~~e~i~~~l~~~~~v~G 323 (475)
T COG0769 244 YITYGCDFKRPDLDYRGIEESSSGSDFVFEPSGGIGEYELPLPGLFNVYNALAAVAAALALGVDLEDILAGLETLKPVPG 323 (475)
T ss_pred EEEECCCCCCCCHHHCCCEEEECCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
T ss_conf 89968899631212226114213540588637873268604122778999999999998749999999999974689998
Q ss_pred HHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 21000135578602300037868999974121100234440354026654600468999999861989999088798989
Q gi|254781102|r 345 RFEFVGTNSRGGRIYVDYAHTSNSLEMILKNIRTITSGRIIVVFGCGGDRDQGKRPIMGKIALDLADIAIVTDDNPRSED 424 (497)
Q Consensus 345 R~E~i~~~~~~~~viiDyahNP~s~~~aL~~l~~~~~~r~i~V~G~~Gdrd~~kr~~mg~~a~~~ad~vi~t~d~~r~e~ 424 (497)
T Consensus 324 RmE~v~~~--~~~v~VDyAHnPd~le~~L~~~~~~~~g~li~VfG~gGDrD~~kr~~mg~ia~~~ad~vivt~dnpR~ed 401 (475)
T COG0769 324 RMELVNIG--GKLVIVDYAHNPDGLEKALRAVRLHAAGRLIVVFGCGGDRDKSKRPDMGAIAEQLADIVIVTSDNPRSED 401 (475)
T ss_pred CEEEECCC--CCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCC
T ss_conf 60687389--9769999534869999999998753498489997766887534303159999855993699189988768
Q ss_pred HHHHHHHHHHCCCC---EEEECCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCCEECCCCHHHHHHHHHHH
Q ss_conf 89999999834798---099789899999999965898899994468866358449788679989999998443
Q gi|254781102|r 425 PEKIRAEIIHGIPG---FIEKGNRIEAIRTAIEMLNKQDVLVVAGKGHETVHIVTNGEKKMSVDCDIIREILGL 495 (497)
Q Consensus 425 ~~~I~~~i~~g~~~---~~~~~dr~eAi~~A~~~a~~gDvili~GkG~e~~~~~~~~~~~~~~d~~~~~~~l~~ 495 (497)
T Consensus 402 p~~i~~~i~~g~~~~~~~~~~~dr~~AI~~ai~~a~~~D~vliagkGhe~yq~~~~-~~~~f~d~~~v~~~l~~ 474 (475)
T COG0769 402 PAVILADILAGIEAPEKYEIIEDREEAIRKALDLAKEGDVVLIAGKGHETYQIMLE-LKRPFDDREVVREALLE 474 (475)
T ss_pred HHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHC-CEEECCCHHHHHHHHHH
T ss_conf 89999999836476641430110999999999863248878996423513563740-35633868999999843