HHsearch alignment for GI: 254781102 and conserved domain: PRK10773

>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed.
Probab=100.00  E-value=0  Score=598.91  Aligned_cols=417  Identities=23%  Similarity=0.321  Sum_probs=332.1

Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC
Q ss_conf             66789887320335565557430024530231468988998038876768889999985988999847322333432234
Q gi|254781102|r    8 YKDFPELINQLSIFPMQWRERKINEVSSDSRHIQAGWIFVAIVGNKEDGHLFIPQAIAQGAEAIVVSSAYSLQDFSATIR   87 (497)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~d~~i~~i~~DSr~v~~g~lFval~G~~~dGh~fi~~A~~~GA~~~i~~~~~~~~~~~~~~~   87 (497)
T Consensus         6 l~~ia~~~~g~----l~~~d~~i~~i~~DSR~v~~g~lFvAl~G~~~DGh~fi~~Ai~~GA~aiv~~~~~~---------   72 (452)
T PRK10773          6 LSQLADILNAE----LQGADITIDAVTTDTRKVTPGCLFVALKGERFDAHDFADQAKAAGAGALLVSRPLD---------   72 (452)
T ss_pred             HHHHHHHHCCE----EECCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCC---------
T ss_conf             99999986999----98898157789965871799988999447989979999999986998999847668---------


Q ss_pred             CCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             79709997998999999999982762002245654306520001233333210232222234544332355445767531
Q gi|254781102|r   88 SNTPILVVDNTRKFLSLFASRLYGKHPENILAVTGTSGKSSVASFVQQICQRSGLSSFQIGPTSTISSFAQDNRLTTPSP  167 (497)
Q Consensus        88 ~~~p~i~V~d~~~aL~~la~~~~~~~~~~vIgITGTnGKTTt~~~l~~iL~~~g~~~~~~g~~~~~~~~~~~~~~TtP~~  167 (497)
T Consensus        73 ~~~~~i~V~d~~~al~~la~~~~~~~~~~vIgITGSnGKTTtk~~i~~iL~~~g~~~~t~gn~n---~~-----iG~p--  142 (452)
T PRK10773         73 IDLPQLIVKDTRLAFGQLAAWVRQQVPARVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLN---ND-----IGVP--  142 (452)
T ss_pred             CCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCC---CC-----CCCC--
T ss_conf             9999899899999999999987515997589999169962599999999997288412456526---88-----7866--


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCH-H-HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             221111111011223333356676-6-65554310432121112321545543211011223455421000000122321
Q gi|254781102|r  168 IYLAKALSYLSSQGVTHVSVEASS-H-GLDQHRLDGIKLIAGSFTNLGRDHIDYHQTQQAYFNAKMRLFEELLPKESPAI  245 (497)
Q Consensus       168 ~~l~~~l~~~~~~g~~~~vlEvSS-~-gl~~~rl~~i~~diaviTNI~~dHLd~~gs~e~y~~aK~~If~~~~~~~~~~V  245 (497)
T Consensus       143 ~tl~~~-----~~~~~~~v~E~g~~~~gei~~~~~~~~pdiaviTNI~~dHLd~~gs~e~~~~aK~~Lf~~l-~~~g~~I  216 (452)
T PRK10773        143 LTLLRL-----TPEYDYAVIELGANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFTGL-PENGIAI  216 (452)
T ss_pred             HHHHCC-----CCHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHCC-CCCCEEE
T ss_conf             076507-----9213357853237985356766400266759998424776540576999999999998178-8798999


Q ss_pred             CCCCCCCHHHHHHHCCCCCCCCCCCCC--CCCCCCCCEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             112542000122210235653222223--333220000001454443211222100101223433222110577888775
Q gi|254781102|r  246 IYADDAYSKEVMKRAHNAGCRVLSVGY--QGKFIHLKKVCAIHNKQQVTISVEGKDFDFLFPLPGEFQVYNALVAAGLCI  323 (497)
Q Consensus       246 iN~Dd~~~~~l~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~l~G~hni~NalaAia~a~  323 (497)
T Consensus       217 lN~Dd~~~~~~~~~~~~~--~v~~~~~~~~~~d~~~~~i~~~~~g~~f~l~~~~~~~~v~l~l~G~hnv~NalaAiava~  294 (452)
T PRK10773        217 MNADNNDWLNWQSVIGSR--KVWRFSPNAANSDFTATNIHVTSHGTEFTLHTPTGSVDVLLPLPGRHNIANALAAAALAM  294 (452)
T ss_pred             EECCCHHHHHHHHHHCCC--EEEEECCCCCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf             979876799999983798--289980687776189999999189418999967951899970761768998999999999


Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC-CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC---CCHH
Q ss_conf             20267676311123443345521000135578602300-0378689999741211002344403540266546---0046
Q gi|254781102|r  324 AIGIDSALVLEHLEKLHVVPGRFEFVGTNSRGGRIYVD-YAHTSNSLEMILKNIRTITSGRIIVVFGCGGDRD---QGKR  399 (497)
Q Consensus       324 ~lGi~~~~i~~~L~~f~~~~gR~E~i~~~~~~~~viiD-yahNP~s~~~aL~~l~~~~~~r~i~V~G~~Gdrd---~~kr  399 (497)
T Consensus       295 ~lG~~~~~i~~~L~~~~~v~GRme~i~~~-~g~~iIdDsYNAnP~Sm~aal~~l~~~~-~~ki~VLGdM~ELG~~s~~~H  372 (452)
T PRK10773        295 SVGATLDAVKAGLANLKAVPGRLFPIQLA-ENQLLLDDSYNANVGSMTAAVQVLAEMP-GYRVLVVGDMAELGAESEACH  372 (452)
T ss_pred             HCCCCHHHHHHHHHHCCCCCCCEEEEECC-CEEEEEEECCCCCHHHHHHHHHHHHHCC-CCEEEEECCHHHCCCHHHHHH
T ss_conf             85999999999997289986740799738-7089997425699799999999997577-976999877377285789999


Q ss_pred             HHHHHHHHH-HCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCE--EEEEC
Q ss_conf             899999986-19899990887989898999999983479809978989999999996589889--99944
Q gi|254781102|r  400 PIMGKIALD-LADIAIVTDDNPRSEDPEKIRAEIIHGIPGFIEKGNRIEAIRTAIEMLNKQDV--LVVAG  466 (497)
Q Consensus       400 ~~mg~~a~~-~ad~vi~t~d~~r~e~~~~I~~~i~~g~~~~~~~~dr~eAi~~A~~~a~~gDv--ili~G  466 (497)
T Consensus       373 ~~v~~~~~~~~id~v~~vG-----~~~~----~~~~~~~~~~~f~~~~~~~~~l~~~l~~~~~~~vLvKG  433 (452)
T PRK10773        373 RQVGEAAKAAGIDRVLSVG-----KLSQ----AISTASGVGEHFADKTALIARLKALLAEQQVITILVKG  433 (452)
T ss_pred             HHHHHHHHHCCCCEEEEEC-----HHHH----HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf             9999999976999999988-----7899----99874187633699999999999887449984899985